JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:58 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3a38a_.name2015-04-17 18:49 0 Job name flag file
[ ]jp_Nrqejwy.align2015-04-17 20:58 21KPSIBLAST alignment in FASTA format
[TXT]jp_Nrqejwy.als2015-04-17 20:58 1.6KAlscript command file for PS/PDF output
[ ]jp_Nrqejwy.blast.gz2015-04-17 20:58 51KCompressed PSIBLAST output file
[TXT]jp_Nrqejwy.coils.csv2015-04-17 20:58 528 COILS output in CSV format
[ ]jp_Nrqejwy.coilseq.lupas_142015-04-17 20:58 3.5KCOILS output, window length 14
[ ]jp_Nrqejwy.coilseq.lupas_212015-04-17 20:58 3.5KCOILS output, window length 21
[ ]jp_Nrqejwy.coilseq.lupas_282015-04-17 20:58 3.5KCOILS output, window length 28
[ ]jp_Nrqejwy.concise2015-04-17 20:58 43KPrediction: coiled-coil, solvent, alignment
[ ]jp_Nrqejwy.concise.blc2015-04-17 20:58 22KBLC format prediction and alignment data
[ ]jp_Nrqejwy.concise.fasta2015-04-17 20:58 22KPrediction: coiled-coil, solvent, alignment
[ ]jp_Nrqejwy.concise.pdf2015-04-17 20:58 114KPDF prediction and alignment data
[ ]jp_Nrqejwy.concise.ps2015-04-17 20:58 2.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_Nrqejwy.fasta2015-04-17 20:54 97 Input query sequence in FASTA format
[ ]jp_Nrqejwy.full_MSA.fasta2015-04-17 20:58 45KFull MSA before JPred filters in FASTA
[TXT]jp_Nrqejwy.full_MSA.fasta.noGaps.html2015-04-17 20:58 63KFull MSA before JPred filters in FASTA
[TXT]jp_Nrqejwy.full_MSA.fasta.withGaps.html2015-04-17 20:58 288KFull MSA before JPred filters in FASTA
[ ]jp_Nrqejwy.hmm2015-04-17 20:58 16KHHMer2 profile of the alignment
[TXT]jp_Nrqejwy.html2015-04-17 20:58 66KHTML prediction and alignment data
[ ]jp_Nrqejwy.input2015-04-17 18:49 90 Raw input data for analysis
[ ]jp_Nrqejwy.jalview2015-04-17 20:58 2.4KJalview annotation file for alignment
[ ]jp_Nrqejwy.jnet2015-04-17 20:58 3.1KJnet secondary structure output
[TXT]jp_Nrqejwy.profile2015-04-17 20:57 14KPSIBLAST profile from alignment
[ ]jp_Nrqejwy.pssm2015-04-17 20:58 18KPSIBLAST PSSM for Jnet
[TXT]jp_Nrqejwy.results.html2016-02-15 12:20 41KJPred results page
[TXT]jp_Nrqejwy.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_Nrqejwy.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_Nrqejwy.seq2015-04-17 18:49 97 Sequence data file
[TXT]jp_Nrqejwy.simple.html2015-04-17 20:58 1.1KBrief HTML: sequence and prediction only
[TXT]jp_Nrqejwy.svg.html2015-04-17 20:58 33KJalview SVG summary of results
[ ]jp_Nrqejwy.tar.gz2015-04-17 20:58 251KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.