A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 19:00 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d3ag3d_.name | 2015-04-17 17:37 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_nM9qjxc.align | 2015-04-17 19:00 | 40K | PSIBLAST alignment in FASTA format |
| jp_nM9qjxc.als | 2015-04-17 19:00 | 2.5K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_nM9qjxc.blast.gz | 2015-04-17 18:59 | 111K | Compressed PSIBLAST output file |
| jp_nM9qjxc.coils.csv | 2015-04-17 19:00 | 894 | COILS output in CSV format |
| jp_nM9qjxc.coilseq.lupas_14 | 2015-04-17 19:00 | 6.0K | COILS output, window length 14 |
| jp_nM9qjxc.coilseq.lupas_21 | 2015-04-17 19:00 | 6.0K | COILS output, window length 21 |
| jp_nM9qjxc.coilseq.lupas_28 | 2015-04-17 19:00 | 6.0K | COILS output, window length 28 |
| jp_nM9qjxc.concise | 2015-04-17 19:00 | 82K | Prediction: coiled-coil, solvent, alignment |
| jp_nM9qjxc.concise.blc | 2015-04-17 19:00 | 42K | BLC format prediction and alignment data |
| jp_nM9qjxc.concise.fasta | 2015-04-17 19:00 | 42K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_nM9qjxc.concise.pdf | 2015-04-17 19:00 | 249K | PDF prediction and alignment data |
| jp_nM9qjxc.concise.ps | 2015-04-17 19:00 | 4.7M | Prediction: coiled-coil, solvent, alignment |
| jp_nM9qjxc.fasta | 2015-04-17 18:56 | 159 | Input query sequence in FASTA format |
| jp_nM9qjxc.full_MSA.fasta | 2015-04-17 19:00 | 123K | Full MSA before JPred filters in FASTA |
| jp_nM9qjxc.full_MSA.fasta.noGaps.html | 2015-04-17 19:00 | 128K | Full MSA before JPred filters in FASTA |
| jp_nM9qjxc.full_MSA.fasta.withGaps.html | 2015-04-17 19:00 | 588K | Full MSA before JPred filters in FASTA |
| jp_nM9qjxc.hmm | 2015-04-17 19:00 | 27K | HHMer2 profile of the alignment |
| jp_nM9qjxc.html | 2015-04-17 19:00 | 100K | HTML prediction and alignment data |
| jp_nM9qjxc.input | 2015-04-17 17:37 | 151 | Raw input data for analysis |
| jp_nM9qjxc.jalview | 2015-04-17 19:00 | 3.7K | Jalview annotation file for alignment |
| jp_nM9qjxc.jnet | 2015-04-17 19:00 | 5.3K | Jnet secondary structure output |
| jp_nM9qjxc.profile | 2015-04-17 18:58 | 23K | PSIBLAST profile from alignment |
| jp_nM9qjxc.pssm | 2015-04-17 19:00 | 31K | PSIBLAST PSSM for Jnet |
| jp_nM9qjxc.results.html | 2016-02-15 12:20 | 67K | JPred results page |
| jp_nM9qjxc.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_nM9qjxc.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_nM9qjxc.seq | 2015-04-17 17:37 | 159 | Sequence data file |
| jp_nM9qjxc.simple.html | 2015-04-17 19:00 | 1.4K | Brief HTML: sequence and prediction only |
![[TXT]](jp_nM9qjxc.svg.html) | jp_nM9qjxc.svg.html | 2015-04-17 19:00 | 59K | Jalview SVG summary of results |
| jp_nM9qjxc.tar.gz | 2015-04-17 19:00 | 506K | Archive containing complete results |
