A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 19:03 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d3ag3e_.name | 2015-04-17 17:37 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_wEpfY7G.align | 2015-04-17 19:03 | 14K | PSIBLAST alignment in FASTA format |
| jp_wEpfY7G.als | 2015-04-17 19:03 | 2.0K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_wEpfY7G.blast.gz | 2015-04-17 19:03 | 70K | Compressed PSIBLAST output file |
| jp_wEpfY7G.coils.csv | 2015-04-17 19:03 | 660 | COILS output in CSV format |
| jp_wEpfY7G.coilseq.lupas_14 | 2015-04-17 19:03 | 4.4K | COILS output, window length 14 |
| jp_wEpfY7G.coilseq.lupas_21 | 2015-04-17 19:03 | 4.4K | COILS output, window length 21 |
| jp_wEpfY7G.coilseq.lupas_28 | 2015-04-17 19:03 | 4.4K | COILS output, window length 28 |
| jp_wEpfY7G.concise | 2015-04-17 19:03 | 30K | Prediction: coiled-coil, solvent, alignment |
| jp_wEpfY7G.concise.blc | 2015-04-17 19:03 | 15K | BLC format prediction and alignment data |
| jp_wEpfY7G.concise.fasta | 2015-04-17 19:03 | 15K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_wEpfY7G.concise.pdf | 2015-04-17 19:03 | 96K | PDF prediction and alignment data |
| jp_wEpfY7G.concise.ps | 2015-04-17 19:03 | 1.7M | Prediction: coiled-coil, solvent, alignment |
| jp_wEpfY7G.fasta | 2015-04-17 18:57 | 119 | Input query sequence in FASTA format |
| jp_wEpfY7G.full_MSA.fasta | 2015-04-17 19:03 | 87K | Full MSA before JPred filters in FASTA |
| jp_wEpfY7G.full_MSA.fasta.noGaps.html | 2015-04-17 19:03 | 82K | Full MSA before JPred filters in FASTA |
| jp_wEpfY7G.full_MSA.fasta.withGaps.html | 2015-04-17 19:03 | 331K | Full MSA before JPred filters in FASTA |
| jp_wEpfY7G.hmm | 2015-04-17 19:03 | 20K | HHMer2 profile of the alignment |
| jp_wEpfY7G.html | 2015-04-17 19:03 | 48K | HTML prediction and alignment data |
| jp_wEpfY7G.input | 2015-04-17 17:37 | 112 | Raw input data for analysis |
| jp_wEpfY7G.jalview | 2015-04-17 19:03 | 3.0K | Jalview annotation file for alignment |
| jp_wEpfY7G.jnet | 2015-04-17 19:03 | 3.9K | Jnet secondary structure output |
| jp_wEpfY7G.profile | 2015-04-17 19:00 | 17K | PSIBLAST profile from alignment |
| jp_wEpfY7G.pssm | 2015-04-17 19:03 | 23K | PSIBLAST PSSM for Jnet |
| jp_wEpfY7G.results.html | 2016-02-15 12:20 | 51K | JPred results page |
| jp_wEpfY7G.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_wEpfY7G.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_wEpfY7G.seq | 2015-04-17 17:37 | 119 | Sequence data file |
| jp_wEpfY7G.simple.html | 2015-04-17 19:03 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_wEpfY7G.svg.html) | jp_wEpfY7G.svg.html | 2015-04-17 19:03 | 43K | Jalview SVG summary of results |
| jp_wEpfY7G.tar.gz | 2015-04-17 19:03 | 244K | Archive containing complete results |
