JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:03 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3ag3g_.name2015-04-17 17:37 0 Job name flag file
[ ]jp_xx0dKJo.align2015-04-17 19:03 29KPSIBLAST alignment in FASTA format
[TXT]jp_xx0dKJo.als2015-04-17 19:03 1.4KAlscript command file for PS/PDF output
[ ]jp_xx0dKJo.blast.gz2015-04-17 19:03 130KCompressed PSIBLAST output file
[TXT]jp_xx0dKJo.coils.csv2015-04-17 19:03 534 COILS output in CSV format
[ ]jp_xx0dKJo.coilseq.lupas_142015-04-17 19:03 3.5KCOILS output, window length 14
[ ]jp_xx0dKJo.coilseq.lupas_212015-04-17 19:03 3.5KCOILS output, window length 21
[ ]jp_xx0dKJo.coilseq.lupas_282015-04-17 19:03 3.5KCOILS output, window length 28
[ ]jp_xx0dKJo.concise2015-04-17 19:03 58KPrediction: coiled-coil, solvent, alignment
[ ]jp_xx0dKJo.concise.blc2015-04-17 19:03 30KBLC format prediction and alignment data
[ ]jp_xx0dKJo.concise.fasta2015-04-17 19:03 30KPrediction: coiled-coil, solvent, alignment
[ ]jp_xx0dKJo.concise.pdf2015-04-17 19:03 177KPDF prediction and alignment data
[ ]jp_xx0dKJo.concise.ps2015-04-17 19:03 3.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_xx0dKJo.fasta2015-04-17 18:57 98 Input query sequence in FASTA format
[ ]jp_xx0dKJo.full_MSA.fasta2015-04-17 19:03 201KFull MSA before JPred filters in FASTA
[TXT]jp_xx0dKJo.full_MSA.fasta.noGaps.html2015-04-17 19:03 117KFull MSA before JPred filters in FASTA
[TXT]jp_xx0dKJo.full_MSA.fasta.withGaps.html2015-04-17 19:03 883KFull MSA before JPred filters in FASTA
[ ]jp_xx0dKJo.hmm2015-04-17 19:03 16KHHMer2 profile of the alignment
[TXT]jp_xx0dKJo.html2015-04-17 19:03 92KHTML prediction and alignment data
[ ]jp_xx0dKJo.input2015-04-17 17:37 91 Raw input data for analysis
[ ]jp_xx0dKJo.jalview2015-04-17 19:03 2.5KJalview annotation file for alignment
[ ]jp_xx0dKJo.jnet2015-04-17 19:03 3.1KJnet secondary structure output
[TXT]jp_xx0dKJo.profile2015-04-17 19:01 14KPSIBLAST profile from alignment
[ ]jp_xx0dKJo.pssm2015-04-17 19:03 18KPSIBLAST PSSM for Jnet
[TXT]jp_xx0dKJo.results.html2016-02-15 12:20 41KJPred results page
[TXT]jp_xx0dKJo.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_xx0dKJo.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_xx0dKJo.seq2015-04-17 17:37 98 Sequence data file
[TXT]jp_xx0dKJo.simple.html2015-04-17 19:03 1.0KBrief HTML: sequence and prediction only
[TXT]jp_xx0dKJo.svg.html2015-04-17 19:03 33KJalview SVG summary of results
[ ]jp_xx0dKJo.tar.gz2015-04-17 19:03 434KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.