JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:05 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3ag3h_.name2015-04-17 17:37 0 Job name flag file
[ ]jp_IdCrqMM.align2015-04-17 19:05 23KPSIBLAST alignment in FASTA format
[TXT]jp_IdCrqMM.als2015-04-17 19:05 1.7KAlscript command file for PS/PDF output
[ ]jp_IdCrqMM.blast.gz2015-04-17 19:05 147KCompressed PSIBLAST output file
[TXT]jp_IdCrqMM.coils.csv2015-04-17 19:05 504 COILS output in CSV format
[ ]jp_IdCrqMM.coilseq.lupas_142015-04-17 19:05 3.3KCOILS output, window length 14
[ ]jp_IdCrqMM.coilseq.lupas_212015-04-17 19:05 3.3KCOILS output, window length 21
[ ]jp_IdCrqMM.coilseq.lupas_282015-04-17 19:05 3.3KCOILS output, window length 28
[ ]jp_IdCrqMM.concise2015-04-17 19:05 46KPrediction: coiled-coil, solvent, alignment
[ ]jp_IdCrqMM.concise.blc2015-04-17 19:05 24KBLC format prediction and alignment data
[ ]jp_IdCrqMM.concise.fasta2015-04-17 19:05 24KPrediction: coiled-coil, solvent, alignment
[ ]jp_IdCrqMM.concise.pdf2015-04-17 19:05 124KPDF prediction and alignment data
[ ]jp_IdCrqMM.concise.ps2015-04-17 19:05 2.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_IdCrqMM.fasta2015-04-17 18:58 93 Input query sequence in FASTA format
[ ]jp_IdCrqMM.full_MSA.fasta2015-04-17 19:05 182KFull MSA before JPred filters in FASTA
[TXT]jp_IdCrqMM.full_MSA.fasta.noGaps.html2015-04-17 19:05 117KFull MSA before JPred filters in FASTA
[TXT]jp_IdCrqMM.full_MSA.fasta.withGaps.html2015-04-17 19:05 667KFull MSA before JPred filters in FASTA
[ ]jp_IdCrqMM.hmm2015-04-17 19:05 15KHHMer2 profile of the alignment
[TXT]jp_IdCrqMM.html2015-04-17 19:05 77KHTML prediction and alignment data
[ ]jp_IdCrqMM.input2015-04-17 17:37 86 Raw input data for analysis
[ ]jp_IdCrqMM.jalview2015-04-17 19:05 2.4KJalview annotation file for alignment
[ ]jp_IdCrqMM.jnet2015-04-17 19:05 3.0KJnet secondary structure output
[TXT]jp_IdCrqMM.profile2015-04-17 19:02 13KPSIBLAST profile from alignment
[ ]jp_IdCrqMM.pssm2015-04-17 19:05 17KPSIBLAST PSSM for Jnet
[TXT]jp_IdCrqMM.results.html2016-02-15 12:20 42KJPred results page
[TXT]jp_IdCrqMM.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_IdCrqMM.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_IdCrqMM.seq2015-04-17 17:37 93 Sequence data file
[TXT]jp_IdCrqMM.simple.html2015-04-17 19:05 1.1KBrief HTML: sequence and prediction only
[TXT]jp_IdCrqMM.svg.html2015-04-17 19:05 33KJalview SVG summary of results
[ ]jp_IdCrqMM.tar.gz2015-04-17 19:05 385KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.