JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:16 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3ag3j_.name2015-04-17 15:46 0 Job name flag file
[ ]jp_meIui8z.align2015-04-17 17:16 12KPSIBLAST alignment in FASTA format
[TXT]jp_meIui8z.als2015-04-17 17:16 1.6KAlscript command file for PS/PDF output
[ ]jp_meIui8z.blast.gz2015-04-17 17:16 48KCompressed PSIBLAST output file
[TXT]jp_meIui8z.coils.csv2015-04-17 17:16 378 COILS output in CSV format
[ ]jp_meIui8z.coilseq.lupas_142015-04-17 17:16 2.4KCOILS output, window length 14
[ ]jp_meIui8z.coilseq.lupas_212015-04-17 17:16 2.4KCOILS output, window length 21
[ ]jp_meIui8z.coilseq.lupas_282015-04-17 17:16 2.4KCOILS output, window length 28
[ ]jp_meIui8z.concise2015-04-17 17:16 25KPrediction: coiled-coil, solvent, alignment
[ ]jp_meIui8z.concise.blc2015-04-17 17:16 13KBLC format prediction and alignment data
[ ]jp_meIui8z.concise.fasta2015-04-17 17:16 13KPrediction: coiled-coil, solvent, alignment
[ ]jp_meIui8z.concise.pdf2015-04-17 17:16 78KPDF prediction and alignment data
[ ]jp_meIui8z.concise.ps2015-04-17 17:16 1.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_meIui8z.fasta2015-04-17 15:59 71 Input query sequence in FASTA format
[ ]jp_meIui8z.full_MSA.fasta2015-04-17 17:16 57KFull MSA before JPred filters in FASTA
[TXT]jp_meIui8z.full_MSA.fasta.noGaps.html2015-04-17 17:16 65KFull MSA before JPred filters in FASTA
[TXT]jp_meIui8z.full_MSA.fasta.withGaps.html2015-04-17 17:16 261KFull MSA before JPred filters in FASTA
[ ]jp_meIui8z.hmm2015-04-17 17:16 11KHHMer2 profile of the alignment
[TXT]jp_meIui8z.html2015-04-17 17:16 51KHTML prediction and alignment data
[ ]jp_meIui8z.input2015-04-17 15:46 65 Raw input data for analysis
[ ]jp_meIui8z.jalview2015-04-17 17:16 2.0KJalview annotation file for alignment
[ ]jp_meIui8z.jnet2015-04-17 17:16 2.2KJnet secondary structure output
[TXT]jp_meIui8z.profile2015-04-17 16:36 9.7KPSIBLAST profile from alignment
[ ]jp_meIui8z.pssm2015-04-17 17:16 12KPSIBLAST PSSM for Jnet
[TXT]jp_meIui8z.results.html2016-02-15 12:20 34KJPred results page
[TXT]jp_meIui8z.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_meIui8z.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_meIui8z.seq2015-04-17 15:46 71 Sequence data file
[TXT]jp_meIui8z.simple.html2015-04-17 17:16 1.0KBrief HTML: sequence and prediction only
[TXT]jp_meIui8z.svg.html2015-04-17 17:16 25KJalview SVG summary of results
[ ]jp_meIui8z.tar.gz2015-04-17 17:16 189KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.