JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:08 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3ar4a2.name2015-04-17 18:12 0 Job name flag file
[ ]jp_Gt6hufB.align2015-04-17 20:08 108KPSIBLAST alignment in FASTA format
[TXT]jp_Gt6hufB.als2015-04-17 20:08 2.6KAlscript command file for PS/PDF output
[ ]jp_Gt6hufB.blast.gz2015-04-17 20:06 8.4MCompressed PSIBLAST output file
[TXT]jp_Gt6hufB.coils.csv2015-04-17 20:08 720 COILS output in CSV format
[ ]jp_Gt6hufB.coilseq.lupas_142015-04-17 20:08 4.8KCOILS output, window length 14
[ ]jp_Gt6hufB.coilseq.lupas_212015-04-17 20:08 4.8KCOILS output, window length 21
[ ]jp_Gt6hufB.coilseq.lupas_282015-04-17 20:08 4.8KCOILS output, window length 28
[ ]jp_Gt6hufB.concise2015-04-17 20:08 211KPrediction: coiled-coil, solvent, alignment
[ ]jp_Gt6hufB.concise.blc2015-04-17 20:08 109KBLC format prediction and alignment data
[ ]jp_Gt6hufB.concise.fasta2015-04-17 20:08 110KPrediction: coiled-coil, solvent, alignment
[ ]jp_Gt6hufB.concise.pdf2015-04-17 20:08 715KPDF prediction and alignment data
[ ]jp_Gt6hufB.concise.ps2015-04-17 20:08 13MPrediction: coiled-coil, solvent, alignment
[ ]jp_Gt6hufB.fasta2015-04-17 19:55 129 Input query sequence in FASTA format
[ ]jp_Gt6hufB.full_MSA.fasta2015-04-17 20:07 14MFull MSA before JPred filters in FASTA
[TXT]jp_Gt6hufB.full_MSA.fasta.noGaps.html2015-04-17 20:08 2.4MFull MSA before JPred filters in FASTA
[TXT]jp_Gt6hufB.full_MSA.fasta.withGaps.html2015-04-17 20:08 36MFull MSA before JPred filters in FASTA
[ ]jp_Gt6hufB.hmm2015-04-17 20:08 22KHHMer2 profile of the alignment
[TXT]jp_Gt6hufB.html2015-04-17 20:08 278KHTML prediction and alignment data
[ ]jp_Gt6hufB.input2015-04-17 18:12 122 Raw input data for analysis
[ ]jp_Gt6hufB.jalview2015-04-17 20:08 3.1KJalview annotation file for alignment
[ ]jp_Gt6hufB.jnet2015-04-17 20:08 4.3KJnet secondary structure output
[TXT]jp_Gt6hufB.profile2015-04-17 20:04 19KPSIBLAST profile from alignment
[ ]jp_Gt6hufB.pssm2015-04-17 20:08 25KPSIBLAST PSSM for Jnet
[TXT]jp_Gt6hufB.results.html2016-02-15 12:20 57KJPred results page
[TXT]jp_Gt6hufB.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_Gt6hufB.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_Gt6hufB.seq2015-04-17 18:12 129 Sequence data file
[TXT]jp_Gt6hufB.simple.html2015-04-17 20:08 1.4KBrief HTML: sequence and prediction only
[TXT]jp_Gt6hufB.svg.html2015-04-17 20:08 49KJalview SVG summary of results
[ ]jp_Gt6hufB.tar.gz2015-04-17 20:08 13MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.