JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:08 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3arcb_.name2015-04-17 17:00 0 Job name flag file
[ ]jp_g9fG02d.align2015-04-17 18:07 133KPSIBLAST alignment in FASTA format
[TXT]jp_g9fG02d.als2015-04-17 18:07 5.8KAlscript command file for PS/PDF output
[ ]jp_g9fG02d.blast.gz2015-04-17 18:07 694KCompressed PSIBLAST output file
[TXT]jp_g9fG02d.coils.csv2015-04-17 18:07 3.0KCOILS output in CSV format
[ ]jp_g9fG02d.coilseq.lupas_142015-04-17 18:07 21KCOILS output, window length 14
[ ]jp_g9fG02d.coilseq.lupas_212015-04-17 18:07 21KCOILS output, window length 21
[ ]jp_g9fG02d.coilseq.lupas_282015-04-17 18:07 21KCOILS output, window length 28
[ ]jp_g9fG02d.concise2015-04-17 18:07 282KPrediction: coiled-coil, solvent, alignment
[ ]jp_g9fG02d.concise.blc2015-04-17 18:07 139KBLC format prediction and alignment data
[ ]jp_g9fG02d.concise.fasta2015-04-17 18:07 139KPrediction: coiled-coil, solvent, alignment
[ ]jp_g9fG02d.concise.pdf2015-04-17 18:07 810KPDF prediction and alignment data
[ ]jp_g9fG02d.concise.ps2015-04-17 18:07 17MPrediction: coiled-coil, solvent, alignment
[ ]jp_g9fG02d.fasta2015-04-17 18:00 524 Input query sequence in FASTA format
[ ]jp_g9fG02d.full_MSA.fasta2015-04-17 18:07 1.7MFull MSA before JPred filters in FASTA
[TXT]jp_g9fG02d.full_MSA.fasta.noGaps.html2015-04-17 18:08 575KFull MSA before JPred filters in FASTA
[TXT]jp_g9fG02d.full_MSA.fasta.withGaps.html2015-04-17 18:08 5.8MFull MSA before JPred filters in FASTA
[ ]jp_g9fG02d.hmm2015-04-17 18:07 95KHHMer2 profile of the alignment
[TXT]jp_g9fG02d.html2015-04-17 18:07 225KHTML prediction and alignment data
[ ]jp_g9fG02d.input2015-04-17 17:00 511 Raw input data for analysis
[ ]jp_g9fG02d.jalview2015-04-17 18:07 11KJalview annotation file for alignment
[ ]jp_g9fG02d.jnet2015-04-17 18:07 18KJnet secondary structure output
[TXT]jp_g9fG02d.profile2015-04-17 18:04 80KPSIBLAST profile from alignment
[ ]jp_g9fG02d.pssm2015-04-17 18:07 108KPSIBLAST PSSM for Jnet
[TXT]jp_g9fG02d.results.html2016-02-15 12:20 208KJPred results page
[TXT]jp_g9fG02d.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_g9fG02d.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_g9fG02d.seq2015-04-17 17:00 524 Sequence data file
[TXT]jp_g9fG02d.simple.html2015-04-17 18:07 2.6KBrief HTML: sequence and prediction only
[TXT]jp_g9fG02d.svg.html2015-04-17 18:08 199KJalview SVG summary of results
[ ]jp_g9fG02d.tar.gz2015-04-17 18:08 2.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.