A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 19:00 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d3arch_.name | 2015-04-17 17:38 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_3h3pXQ2.align | 2015-04-17 19:00 | 737 | PSIBLAST alignment in FASTA format |
| jp_3h3pXQ2.als | 2015-04-17 19:00 | 1.7K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_3h3pXQ2.blast.gz | 2015-04-17 19:00 | 3.1K | Compressed PSIBLAST output file |
| jp_3h3pXQ2.coils.csv | 2015-04-17 19:00 | 420 | COILS output in CSV format |
| jp_3h3pXQ2.coilseq.lupas_14 | 2015-04-17 19:00 | 2.7K | COILS output, window length 14 |
| jp_3h3pXQ2.coilseq.lupas_21 | 2015-04-17 19:00 | 2.7K | COILS output, window length 21 |
| jp_3h3pXQ2.coilseq.lupas_28 | 2015-04-17 19:00 | 2.7K | COILS output, window length 28 |
| jp_3h3pXQ2.concise | 2015-04-17 19:00 | 4.2K | Prediction: coiled-coil, solvent, alignment |
| jp_3h3pXQ2.concise.blc | 2015-04-17 19:00 | 1.8K | BLC format prediction and alignment data |
| jp_3h3pXQ2.concise.fasta | 2015-04-17 19:00 | 1.5K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_3h3pXQ2.concise.pdf | 2015-04-17 19:00 | 12K | PDF prediction and alignment data |
| jp_3h3pXQ2.concise.ps | 2015-04-17 19:00 | 190K | Prediction: coiled-coil, solvent, alignment |
| jp_3h3pXQ2.fasta | 2015-04-17 18:59 | 78 | Input query sequence in FASTA format |
| jp_3h3pXQ2.full_MSA.fasta | 2015-04-17 19:00 | 1.7K | Full MSA before JPred filters in FASTA |
| jp_3h3pXQ2.full_MSA.fasta.noGaps.html | 2015-04-17 19:00 | 4.2K | Full MSA before JPred filters in FASTA |
| jp_3h3pXQ2.full_MSA.fasta.withGaps.html | 2015-04-17 19:00 | 4.2K | Full MSA before JPred filters in FASTA |
| jp_3h3pXQ2.hmm | 2015-04-17 19:00 | 12K | HHMer2 profile of the alignment |
| jp_3h3pXQ2.html | 2015-04-17 19:00 | 9.8K | HTML prediction and alignment data |
| jp_3h3pXQ2.input | 2015-04-17 17:38 | 72 | Raw input data for analysis |
| jp_3h3pXQ2.jalview | 2015-04-17 19:00 | 2.1K | Jalview annotation file for alignment |
| jp_3h3pXQ2.jnet | 2015-04-17 19:00 | 2.5K | Jnet secondary structure output |
| jp_3h3pXQ2.profile | 2015-04-17 18:59 | 11K | PSIBLAST profile from alignment |
| jp_3h3pXQ2.pssm | 2015-04-17 19:00 | 14K | PSIBLAST PSSM for Jnet |
| jp_3h3pXQ2.results.html | 2016-02-15 12:20 | 36K | JPred results page |
| jp_3h3pXQ2.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_3h3pXQ2.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_3h3pXQ2.seq | 2015-04-17 17:38 | 78 | Sequence data file |
| jp_3h3pXQ2.simple.html | 2015-04-17 19:00 | 1.0K | Brief HTML: sequence and prediction only |
![[TXT]](jp_3h3pXQ2.svg.html) | jp_3h3pXQ2.svg.html | 2015-04-17 19:00 | 28K | Jalview SVG summary of results |
| jp_3h3pXQ2.tar.gz | 2015-04-17 19:00 | 35K | Archive containing complete results |
