JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:05 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3b0ga2.name2015-04-17 17:38 0 Job name flag file
[ ]jp_9JlwYx1.align2015-04-17 19:04 128KPSIBLAST alignment in FASTA format
[TXT]jp_9JlwYx1.als2015-04-17 19:04 2.6KAlscript command file for PS/PDF output
[ ]jp_9JlwYx1.blast.gz2015-04-17 19:03 4.0MCompressed PSIBLAST output file
[TXT]jp_9JlwYx1.coils.csv2015-04-17 19:04 1.0KCOILS output in CSV format
[ ]jp_9JlwYx1.coilseq.lupas_142015-04-17 19:04 7.2KCOILS output, window length 14
[ ]jp_9JlwYx1.coilseq.lupas_212015-04-17 19:04 7.2KCOILS output, window length 21
[ ]jp_9JlwYx1.coilseq.lupas_282015-04-17 19:04 7.2KCOILS output, window length 28
[ ]jp_9JlwYx1.concise2015-04-17 19:04 253KPrediction: coiled-coil, solvent, alignment
[ ]jp_9JlwYx1.concise.blc2015-04-17 19:04 129KBLC format prediction and alignment data
[ ]jp_9JlwYx1.concise.fasta2015-04-17 19:04 130KPrediction: coiled-coil, solvent, alignment
[ ]jp_9JlwYx1.concise.pdf2015-04-17 19:04 864KPDF prediction and alignment data
[ ]jp_9JlwYx1.concise.ps2015-04-17 19:04 15MPrediction: coiled-coil, solvent, alignment
[ ]jp_9JlwYx1.fasta2015-04-17 18:59 186 Input query sequence in FASTA format
[ ]jp_9JlwYx1.full_MSA.fasta2015-04-17 19:04 12MFull MSA before JPred filters in FASTA
[TXT]jp_9JlwYx1.full_MSA.fasta.noGaps.html2015-04-17 19:05 1.5MFull MSA before JPred filters in FASTA
[TXT]jp_9JlwYx1.full_MSA.fasta.withGaps.html2015-04-17 19:05 30MFull MSA before JPred filters in FASTA
[ ]jp_9JlwYx1.hmm2015-04-17 19:04 32KHHMer2 profile of the alignment
[TXT]jp_9JlwYx1.html2015-04-17 19:04 274KHTML prediction and alignment data
[ ]jp_9JlwYx1.input2015-04-17 17:38 178 Raw input data for analysis
[ ]jp_9JlwYx1.jalview2015-04-17 19:04 4.2KJalview annotation file for alignment
[ ]jp_9JlwYx1.jnet2015-04-17 19:04 6.3KJnet secondary structure output
[TXT]jp_9JlwYx1.profile2015-04-17 19:02 28KPSIBLAST profile from alignment
[ ]jp_9JlwYx1.pssm2015-04-17 19:04 37KPSIBLAST PSSM for Jnet
[TXT]jp_9JlwYx1.results.html2016-02-15 12:20 76KJPred results page
[TXT]jp_9JlwYx1.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_9JlwYx1.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_9JlwYx1.seq2015-04-17 17:38 186 Sequence data file
[TXT]jp_9JlwYx1.simple.html2015-04-17 19:04 1.4KBrief HTML: sequence and prediction only
[TXT]jp_9JlwYx1.svg.html2015-04-17 19:05 68KJalview SVG summary of results
[ ]jp_9JlwYx1.tar.gz2015-04-17 19:05 7.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.