JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:01 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3bi1a2.name2015-04-17 18:49 0 Job name flag file
[ ]jp_FVKz0eF.align2015-04-17 21:00 203KPSIBLAST alignment in FASTA format
[TXT]jp_FVKz0eF.als2015-04-17 21:00 3.0KAlscript command file for PS/PDF output
[ ]jp_FVKz0eF.blast.gz2015-04-17 21:00 1.6MCompressed PSIBLAST output file
[TXT]jp_FVKz0eF.coils.csv2015-04-17 21:00 1.4KCOILS output in CSV format
[ ]jp_FVKz0eF.coilseq.lupas_142015-04-17 21:00 9.8KCOILS output, window length 14
[ ]jp_FVKz0eF.coilseq.lupas_212015-04-17 21:00 9.8KCOILS output, window length 21
[ ]jp_FVKz0eF.coilseq.lupas_282015-04-17 21:00 9.8KCOILS output, window length 28
[ ]jp_FVKz0eF.concise2015-04-17 21:00 403KPrediction: coiled-coil, solvent, alignment
[ ]jp_FVKz0eF.concise.blc2015-04-17 21:00 204KBLC format prediction and alignment data
[ ]jp_FVKz0eF.concise.fasta2015-04-17 21:00 206KPrediction: coiled-coil, solvent, alignment
[ ]jp_FVKz0eF.concise.pdf2015-04-17 21:01 1.3MPDF prediction and alignment data
[ ]jp_FVKz0eF.concise.ps2015-04-17 21:00 25MPrediction: coiled-coil, solvent, alignment
[ ]jp_FVKz0eF.fasta2015-04-17 20:54 249 Input query sequence in FASTA format
[ ]jp_FVKz0eF.full_MSA.fasta2015-04-17 21:00 2.6MFull MSA before JPred filters in FASTA
[TXT]jp_FVKz0eF.full_MSA.fasta.noGaps.html2015-04-17 21:01 550KFull MSA before JPred filters in FASTA
[TXT]jp_FVKz0eF.full_MSA.fasta.withGaps.html2015-04-17 21:01 9.7MFull MSA before JPred filters in FASTA
[ ]jp_FVKz0eF.hmm2015-04-17 21:00 44KHHMer2 profile of the alignment
[TXT]jp_FVKz0eF.html2015-04-17 21:00 377KHTML prediction and alignment data
[ ]jp_FVKz0eF.input2015-04-17 18:49 240 Raw input data for analysis
[ ]jp_FVKz0eF.jalview2015-04-17 21:00 5.4KJalview annotation file for alignment
[ ]jp_FVKz0eF.jnet2015-04-17 21:00 8.5KJnet secondary structure output
[TXT]jp_FVKz0eF.profile2015-04-17 20:58 37KPSIBLAST profile from alignment
[ ]jp_FVKz0eF.pssm2015-04-17 21:00 50KPSIBLAST PSSM for Jnet
[TXT]jp_FVKz0eF.results.html2016-02-15 12:20 99KJPred results page
[TXT]jp_FVKz0eF.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_FVKz0eF.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_FVKz0eF.seq2015-04-17 18:49 249 Sequence data file
[TXT]jp_FVKz0eF.simple.html2015-04-17 21:00 1.6KBrief HTML: sequence and prediction only
[TXT]jp_FVKz0eF.svg.html2015-04-17 21:01 90KJalview SVG summary of results
[ ]jp_FVKz0eF.tar.gz2015-04-17 21:01 4.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.