JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:08 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3bofa2.name2015-04-17 18:13 0 Job name flag file
[ ]jp_qrwXIK3.align2015-04-17 20:07 283KPSIBLAST alignment in FASTA format
[TXT]jp_qrwXIK3.als2015-04-17 20:07 4.2KAlscript command file for PS/PDF output
[ ]jp_qrwXIK3.blast.gz2015-04-17 20:05 9.8MCompressed PSIBLAST output file
[TXT]jp_qrwXIK3.coils.csv2015-04-17 20:07 1.8KCOILS output in CSV format
[ ]jp_qrwXIK3.coilseq.lupas_142015-04-17 20:07 13KCOILS output, window length 14
[ ]jp_qrwXIK3.coilseq.lupas_212015-04-17 20:07 13KCOILS output, window length 21
[ ]jp_qrwXIK3.coilseq.lupas_282015-04-17 20:07 13KCOILS output, window length 28
[ ]jp_qrwXIK3.concise2015-04-17 20:07 561KPrediction: coiled-coil, solvent, alignment
[ ]jp_qrwXIK3.concise.blc2015-04-17 20:07 283KBLC format prediction and alignment data
[ ]jp_qrwXIK3.concise.fasta2015-04-17 20:07 286KPrediction: coiled-coil, solvent, alignment
[ ]jp_qrwXIK3.concise.pdf2015-04-17 20:08 2.0MPDF prediction and alignment data
[ ]jp_qrwXIK3.concise.ps2015-04-17 20:07 36MPrediction: coiled-coil, solvent, alignment
[ ]jp_qrwXIK3.fasta2015-04-17 19:58 317 Input query sequence in FASTA format
[ ]jp_qrwXIK3.full_MSA.fasta2015-04-17 20:06 19MFull MSA before JPred filters in FASTA
[TXT]jp_qrwXIK3.full_MSA.fasta.noGaps.html2015-04-17 20:08 1.8MFull MSA before JPred filters in FASTA
[TXT]jp_qrwXIK3.full_MSA.fasta.withGaps.html2015-04-17 20:08 49MFull MSA before JPred filters in FASTA
[ ]jp_qrwXIK3.hmm2015-04-17 20:07 56KHHMer2 profile of the alignment
[TXT]jp_qrwXIK3.html2015-04-17 20:07 483KHTML prediction and alignment data
[ ]jp_qrwXIK3.input2015-04-17 18:13 307 Raw input data for analysis
[ ]jp_qrwXIK3.jalview2015-04-17 20:07 6.9KJalview annotation file for alignment
[ ]jp_qrwXIK3.jnet2015-04-17 20:07 11KJnet secondary structure output
[TXT]jp_qrwXIK3.profile2015-04-17 20:03 48KPSIBLAST profile from alignment
[ ]jp_qrwXIK3.pssm2015-04-17 20:07 64KPSIBLAST PSSM for Jnet
[TXT]jp_qrwXIK3.results.html2016-02-15 12:20 130KJPred results page
[TXT]jp_qrwXIK3.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_qrwXIK3.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_qrwXIK3.seq2015-04-17 18:13 317 Sequence data file
[TXT]jp_qrwXIK3.simple.html2015-04-17 20:07 2.0KBrief HTML: sequence and prediction only
[TXT]jp_qrwXIK3.svg.html2015-04-17 20:08 121KJalview SVG summary of results
[ ]jp_qrwXIK3.tar.gz2015-04-17 20:08 17MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.