JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:03 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3bqoa_.name2015-04-17 17:39 0 Job name flag file
[ ]jp_uxc8iQ2.align2015-04-17 19:03 18KPSIBLAST alignment in FASTA format
[TXT]jp_uxc8iQ2.als2015-04-17 19:03 2.8KAlscript command file for PS/PDF output
[ ]jp_uxc8iQ2.blast.gz2015-04-17 19:03 87KCompressed PSIBLAST output file
[TXT]jp_uxc8iQ2.coils.csv2015-04-17 19:03 1.2KCOILS output in CSV format
[ ]jp_uxc8iQ2.coilseq.lupas_142015-04-17 19:03 8.5KCOILS output, window length 14
[ ]jp_uxc8iQ2.coilseq.lupas_212015-04-17 19:03 8.5KCOILS output, window length 21
[ ]jp_uxc8iQ2.coilseq.lupas_282015-04-17 19:03 8.5KCOILS output, window length 28
[ ]jp_uxc8iQ2.concise2015-04-17 19:03 44KPrediction: coiled-coil, solvent, alignment
[ ]jp_uxc8iQ2.concise.blc2015-04-17 19:03 21KBLC format prediction and alignment data
[ ]jp_uxc8iQ2.concise.fasta2015-04-17 19:03 21KPrediction: coiled-coil, solvent, alignment
[ ]jp_uxc8iQ2.concise.pdf2015-04-17 19:03 143KPDF prediction and alignment data
[ ]jp_uxc8iQ2.concise.ps2015-04-17 19:03 2.5MPrediction: coiled-coil, solvent, alignment
[ ]jp_uxc8iQ2.fasta2015-04-17 19:00 217 Input query sequence in FASTA format
[ ]jp_uxc8iQ2.full_MSA.fasta2015-04-17 19:03 132KFull MSA before JPred filters in FASTA
[TXT]jp_uxc8iQ2.full_MSA.fasta.noGaps.html2015-04-17 19:03 88KFull MSA before JPred filters in FASTA
[TXT]jp_uxc8iQ2.full_MSA.fasta.withGaps.html2015-04-17 19:03 484KFull MSA before JPred filters in FASTA
[ ]jp_uxc8iQ2.hmm2015-04-17 19:03 38KHHMer2 profile of the alignment
[TXT]jp_uxc8iQ2.html2015-04-17 19:03 57KHTML prediction and alignment data
[ ]jp_uxc8iQ2.input2015-04-17 17:39 209 Raw input data for analysis
[ ]jp_uxc8iQ2.jalview2015-04-17 19:03 5.0KJalview annotation file for alignment
[ ]jp_uxc8iQ2.jnet2015-04-17 19:03 7.4KJnet secondary structure output
[TXT]jp_uxc8iQ2.profile2015-04-17 19:02 32KPSIBLAST profile from alignment
[ ]jp_uxc8iQ2.pssm2015-04-17 19:03 43KPSIBLAST PSSM for Jnet
[TXT]jp_uxc8iQ2.results.html2016-02-15 12:20 91KJPred results page
[TXT]jp_uxc8iQ2.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_uxc8iQ2.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_uxc8iQ2.seq2015-04-17 17:39 217 Sequence data file
[TXT]jp_uxc8iQ2.simple.html2015-04-17 19:03 1.5KBrief HTML: sequence and prediction only
[TXT]jp_uxc8iQ2.svg.html2015-04-17 19:03 82KJalview SVG summary of results
[ ]jp_uxc8iQ2.tar.gz2015-04-17 19:03 343KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.