JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:37 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3bvua1.name2015-04-17 19:27 0 Job name flag file
[ ]jp_qLqdpng.align2015-04-17 22:37 113KPSIBLAST alignment in FASTA format
[TXT]jp_qLqdpng.als2015-04-17 22:37 1.8KAlscript command file for PS/PDF output
[ ]jp_qLqdpng.blast.gz2015-04-17 22:36 1.0MCompressed PSIBLAST output file
[TXT]jp_qLqdpng.coils.csv2015-04-17 22:37 696 COILS output in CSV format
[ ]jp_qLqdpng.coilseq.lupas_142015-04-17 22:37 4.7KCOILS output, window length 14
[ ]jp_qLqdpng.coilseq.lupas_212015-04-17 22:37 4.7KCOILS output, window length 21
[ ]jp_qLqdpng.coilseq.lupas_282015-04-17 22:37 4.7KCOILS output, window length 28
[ ]jp_qLqdpng.concise2015-04-17 22:37 218KPrediction: coiled-coil, solvent, alignment
[ ]jp_qLqdpng.concise.blc2015-04-17 22:37 113KBLC format prediction and alignment data
[ ]jp_qLqdpng.concise.fasta2015-04-17 22:37 114KPrediction: coiled-coil, solvent, alignment
[ ]jp_qLqdpng.concise.pdf2015-04-17 22:37 706KPDF prediction and alignment data
[ ]jp_qLqdpng.concise.ps2015-04-17 22:37 13MPrediction: coiled-coil, solvent, alignment
[ ]jp_qLqdpng.fasta2015-04-17 22:02 125 Input query sequence in FASTA format
[ ]jp_qLqdpng.full_MSA.fasta2015-04-17 22:36 2.1MFull MSA before JPred filters in FASTA
[TXT]jp_qLqdpng.full_MSA.fasta.noGaps.html2015-04-17 22:37 633KFull MSA before JPred filters in FASTA
[TXT]jp_qLqdpng.full_MSA.fasta.withGaps.html2015-04-17 22:37 7.8MFull MSA before JPred filters in FASTA
[ ]jp_qLqdpng.hmm2015-04-17 22:37 21KHHMer2 profile of the alignment
[TXT]jp_qLqdpng.html2015-04-17 22:37 295KHTML prediction and alignment data
[ ]jp_qLqdpng.input2015-04-17 19:27 118 Raw input data for analysis
[ ]jp_qLqdpng.jalview2015-04-17 22:37 3.1KJalview annotation file for alignment
[ ]jp_qLqdpng.jnet2015-04-17 22:37 4.1KJnet secondary structure output
[TXT]jp_qLqdpng.profile2015-04-17 22:32 18KPSIBLAST profile from alignment
[ ]jp_qLqdpng.pssm2015-04-17 22:37 24KPSIBLAST PSSM for Jnet
[TXT]jp_qLqdpng.results.html2016-02-15 12:20 52KJPred results page
[TXT]jp_qLqdpng.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_qLqdpng.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_qLqdpng.seq2015-04-17 19:27 125 Sequence data file
[TXT]jp_qLqdpng.simple.html2015-04-17 22:37 1.2KBrief HTML: sequence and prediction only
[TXT]jp_qLqdpng.svg.html2015-04-17 22:37 44KJalview SVG summary of results
[ ]jp_qLqdpng.tar.gz2015-04-17 22:37 2.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.