JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:50 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3bwha_.name2015-04-17 18:52 0 Job name flag file
[ ]jp_EUCopXo.align2015-04-17 21:49 74KPSIBLAST alignment in FASTA format
[TXT]jp_EUCopXo.als2015-04-17 21:49 3.7KAlscript command file for PS/PDF output
[ ]jp_EUCopXo.blast.gz2015-04-17 21:49 274KCompressed PSIBLAST output file
[TXT]jp_EUCopXo.coils.csv2015-04-17 21:49 1.5KCOILS output in CSV format
[ ]jp_EUCopXo.coilseq.lupas_142015-04-17 21:49 10KCOILS output, window length 14
[ ]jp_EUCopXo.coilseq.lupas_212015-04-17 21:49 10KCOILS output, window length 21
[ ]jp_EUCopXo.coilseq.lupas_282015-04-17 21:49 10KCOILS output, window length 28
[ ]jp_EUCopXo.concise2015-04-17 21:49 153KPrediction: coiled-coil, solvent, alignment
[ ]jp_EUCopXo.concise.blc2015-04-17 21:49 76KBLC format prediction and alignment data
[ ]jp_EUCopXo.concise.fasta2015-04-17 21:49 76KPrediction: coiled-coil, solvent, alignment
[ ]jp_EUCopXo.concise.pdf2015-04-17 21:50 517KPDF prediction and alignment data
[ ]jp_EUCopXo.concise.ps2015-04-17 21:49 9.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_EUCopXo.fasta2015-04-17 20:58 260 Input query sequence in FASTA format
[ ]jp_EUCopXo.full_MSA.fasta2015-04-17 21:49 567KFull MSA before JPred filters in FASTA
[TXT]jp_EUCopXo.full_MSA.fasta.noGaps.html2015-04-17 21:50 147KFull MSA before JPred filters in FASTA
[TXT]jp_EUCopXo.full_MSA.fasta.withGaps.html2015-04-17 21:50 2.3MFull MSA before JPred filters in FASTA
[ ]jp_EUCopXo.hmm2015-04-17 21:49 46KHHMer2 profile of the alignment
[TXT]jp_EUCopXo.html2015-04-17 21:49 152KHTML prediction and alignment data
[ ]jp_EUCopXo.input2015-04-17 18:52 251 Raw input data for analysis
[ ]jp_EUCopXo.jalview2015-04-17 21:49 5.7KJalview annotation file for alignment
[ ]jp_EUCopXo.jnet2015-04-17 21:49 8.9KJnet secondary structure output
[TXT]jp_EUCopXo.profile2015-04-17 21:41 39KPSIBLAST profile from alignment
[ ]jp_EUCopXo.pssm2015-04-17 21:49 52KPSIBLAST PSSM for Jnet
[TXT]jp_EUCopXo.results.html2016-02-15 12:20 107KJPred results page
[TXT]jp_EUCopXo.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_EUCopXo.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_EUCopXo.seq2015-04-17 18:52 260 Sequence data file
[TXT]jp_EUCopXo.simple.html2015-04-17 21:49 1.7KBrief HTML: sequence and prediction only
[TXT]jp_EUCopXo.svg.html2015-04-17 21:50 98KJalview SVG summary of results
[ ]jp_EUCopXo.tar.gz2015-04-17 21:50 1.2MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.