A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 21:01 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d3bwud_.name | 2015-04-17 18:50 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_GbTXyNn.align | 2015-04-17 21:01 | 113K | PSIBLAST alignment in FASTA format |
| jp_GbTXyNn.als | 2015-04-17 21:01 | 2.6K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_GbTXyNn.blast.gz | 2015-04-17 21:00 | 1.1M | Compressed PSIBLAST output file |
| jp_GbTXyNn.coils.csv | 2015-04-17 21:01 | 756 | COILS output in CSV format |
| jp_GbTXyNn.coilseq.lupas_14 | 2015-04-17 21:01 | 5.1K | COILS output, window length 14 |
| jp_GbTXyNn.coilseq.lupas_21 | 2015-04-17 21:01 | 5.1K | COILS output, window length 21 |
| jp_GbTXyNn.coilseq.lupas_28 | 2015-04-17 21:01 | 5.1K | COILS output, window length 28 |
| jp_GbTXyNn.concise | 2015-04-17 21:01 | 221K | Prediction: coiled-coil, solvent, alignment |
| jp_GbTXyNn.concise.blc | 2015-04-17 21:01 | 113K | BLC format prediction and alignment data |
| jp_GbTXyNn.concise.fasta | 2015-04-17 21:01 | 114K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_GbTXyNn.concise.pdf | 2015-04-17 21:01 | 800K | PDF prediction and alignment data |
| jp_GbTXyNn.concise.ps | 2015-04-17 21:01 | 13M | Prediction: coiled-coil, solvent, alignment |
| jp_GbTXyNn.fasta | 2015-04-17 20:55 | 135 | Input query sequence in FASTA format |
| jp_GbTXyNn.full_MSA.fasta | 2015-04-17 21:00 | 1.8M | Full MSA before JPred filters in FASTA |
| jp_GbTXyNn.full_MSA.fasta.noGaps.html | 2015-04-17 21:01 | 530K | Full MSA before JPred filters in FASTA |
| jp_GbTXyNn.full_MSA.fasta.withGaps.html | 2015-04-17 21:01 | 6.7M | Full MSA before JPred filters in FASTA |
| jp_GbTXyNn.hmm | 2015-04-17 21:01 | 23K | HHMer2 profile of the alignment |
| jp_GbTXyNn.html | 2015-04-17 21:01 | 281K | HTML prediction and alignment data |
| jp_GbTXyNn.input | 2015-04-17 18:50 | 128 | Raw input data for analysis |
| jp_GbTXyNn.jalview | 2015-04-17 21:01 | 3.2K | Jalview annotation file for alignment |
| jp_GbTXyNn.jnet | 2015-04-17 21:01 | 4.5K | Jnet secondary structure output |
| jp_GbTXyNn.profile | 2015-04-17 20:58 | 20K | PSIBLAST profile from alignment |
| jp_GbTXyNn.pssm | 2015-04-17 21:01 | 26K | PSIBLAST PSSM for Jnet |
| jp_GbTXyNn.results.html | 2016-02-15 12:20 | 58K | JPred results page |
| jp_GbTXyNn.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_GbTXyNn.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_GbTXyNn.seq | 2015-04-17 18:50 | 135 | Sequence data file |
| jp_GbTXyNn.simple.html | 2015-04-17 21:01 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_GbTXyNn.svg.html) | jp_GbTXyNn.svg.html | 2015-04-17 21:01 | 50K | Jalview SVG summary of results |
| jp_GbTXyNn.tar.gz | 2015-04-17 21:01 | 2.8M | Archive containing complete results |
