A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:05 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d3byqa1.name | 2015-04-17 18:13 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_AHsSxK2.align | 2015-04-17 20:05 | 39K | PSIBLAST alignment in FASTA format |
| jp_AHsSxK2.als | 2015-04-17 20:05 | 3.0K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_AHsSxK2.blast.gz | 2015-04-17 20:05 | 144K | Compressed PSIBLAST output file |
| jp_AHsSxK2.coils.csv | 2015-04-17 20:05 | 1.1K | COILS output in CSV format |
| jp_AHsSxK2.coilseq.lupas_14 | 2015-04-17 20:05 | 8.0K | COILS output, window length 14 |
| jp_AHsSxK2.coilseq.lupas_21 | 2015-04-17 20:05 | 8.0K | COILS output, window length 21 |
| jp_AHsSxK2.coilseq.lupas_28 | 2015-04-17 20:05 | 8.0K | COILS output, window length 28 |
| jp_AHsSxK2.concise | 2015-04-17 20:05 | 83K | Prediction: coiled-coil, solvent, alignment |
| jp_AHsSxK2.concise.blc | 2015-04-17 20:05 | 41K | BLC format prediction and alignment data |
| jp_AHsSxK2.concise.fasta | 2015-04-17 20:05 | 41K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_AHsSxK2.concise.pdf | 2015-04-17 20:05 | 286K | PDF prediction and alignment data |
| jp_AHsSxK2.concise.ps | 2015-04-17 20:05 | 5.0M | Prediction: coiled-coil, solvent, alignment |
| jp_AHsSxK2.fasta | 2015-04-17 19:58 | 206 | Input query sequence in FASTA format |
| jp_AHsSxK2.full_MSA.fasta | 2015-04-17 20:05 | 136K | Full MSA before JPred filters in FASTA |
| jp_AHsSxK2.full_MSA.fasta.noGaps.html | 2015-04-17 20:05 | 118K | Full MSA before JPred filters in FASTA |
| jp_AHsSxK2.full_MSA.fasta.withGaps.html | 2015-04-17 20:05 | 672K | Full MSA before JPred filters in FASTA |
| jp_AHsSxK2.hmm | 2015-04-17 20:05 | 36K | HHMer2 profile of the alignment |
| jp_AHsSxK2.html | 2015-04-17 20:05 | 94K | HTML prediction and alignment data |
| jp_AHsSxK2.input | 2015-04-17 18:13 | 198 | Raw input data for analysis |
| jp_AHsSxK2.jalview | 2015-04-17 20:05 | 4.6K | Jalview annotation file for alignment |
| jp_AHsSxK2.jnet | 2015-04-17 20:05 | 7.0K | Jnet secondary structure output |
| jp_AHsSxK2.profile | 2015-04-17 20:03 | 31K | PSIBLAST profile from alignment |
| jp_AHsSxK2.pssm | 2015-04-17 20:05 | 41K | PSIBLAST PSSM for Jnet |
| jp_AHsSxK2.results.html | 2016-02-15 12:20 | 84K | JPred results page |
| jp_AHsSxK2.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_AHsSxK2.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_AHsSxK2.seq | 2015-04-17 18:13 | 206 | Sequence data file |
| jp_AHsSxK2.simple.html | 2015-04-17 20:05 | 1.5K | Brief HTML: sequence and prediction only |
![[TXT]](jp_AHsSxK2.svg.html) | jp_AHsSxK2.svg.html | 2015-04-17 20:05 | 76K | Jalview SVG summary of results |
| jp_AHsSxK2.tar.gz | 2015-04-17 20:05 | 605K | Archive containing complete results |
