JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:04 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3bzka3.name2015-04-17 18:50 0 Job name flag file
[ ]jp_2WSz9hP.align2015-04-17 21:03 319KPSIBLAST alignment in FASTA format
[TXT]jp_2WSz9hP.als2015-04-17 21:03 3.9KAlscript command file for PS/PDF output
[ ]jp_2WSz9hP.blast.gz2015-04-17 21:02 4.1MCompressed PSIBLAST output file
[TXT]jp_2WSz9hP.coils.csv2015-04-17 21:03 1.9KCOILS output in CSV format
[ ]jp_2WSz9hP.coilseq.lupas_142015-04-17 21:03 14KCOILS output, window length 14
[ ]jp_2WSz9hP.coilseq.lupas_212015-04-17 21:03 14KCOILS output, window length 21
[ ]jp_2WSz9hP.coilseq.lupas_282015-04-17 21:03 14KCOILS output, window length 28
[ ]jp_2WSz9hP.concise2015-04-17 21:03 633KPrediction: coiled-coil, solvent, alignment
[ ]jp_2WSz9hP.concise.blc2015-04-17 21:03 319KBLC format prediction and alignment data
[ ]jp_2WSz9hP.concise.fasta2015-04-17 21:03 322KPrediction: coiled-coil, solvent, alignment
[ ]jp_2WSz9hP.concise.pdf2015-04-17 21:04 2.1MPDF prediction and alignment data
[ ]jp_2WSz9hP.concise.ps2015-04-17 21:03 40MPrediction: coiled-coil, solvent, alignment
[ ]jp_2WSz9hP.fasta2015-04-17 20:55 339 Input query sequence in FASTA format
[ ]jp_2WSz9hP.full_MSA.fasta2015-04-17 21:02 9.0MFull MSA before JPred filters in FASTA
[TXT]jp_2WSz9hP.full_MSA.fasta.noGaps.html2015-04-17 21:04 1.2MFull MSA before JPred filters in FASTA
[TXT]jp_2WSz9hP.full_MSA.fasta.withGaps.html2015-04-17 21:04 24MFull MSA before JPred filters in FASTA
[ ]jp_2WSz9hP.hmm2015-04-17 21:03 60KHHMer2 profile of the alignment
[TXT]jp_2WSz9hP.html2015-04-17 21:03 532KHTML prediction and alignment data
[ ]jp_2WSz9hP.input2015-04-17 18:50 329 Raw input data for analysis
[ ]jp_2WSz9hP.jalview2015-04-17 21:03 7.4KJalview annotation file for alignment
[ ]jp_2WSz9hP.jnet2015-04-17 21:03 12KJnet secondary structure output
[TXT]jp_2WSz9hP.profile2015-04-17 21:00 51KPSIBLAST profile from alignment
[ ]jp_2WSz9hP.pssm2015-04-17 21:03 69KPSIBLAST PSSM for Jnet
[TXT]jp_2WSz9hP.results.html2016-02-15 12:20 137KJPred results page
[TXT]jp_2WSz9hP.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_2WSz9hP.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_2WSz9hP.seq2015-04-17 18:50 339 Sequence data file
[TXT]jp_2WSz9hP.simple.html2015-04-17 21:03 1.9KBrief HTML: sequence and prediction only
[TXT]jp_2WSz9hP.svg.html2015-04-17 21:04 129KJalview SVG summary of results
[ ]jp_2WSz9hP.tar.gz2015-04-17 21:04 9.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.