JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:35 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3c8ga1.name2015-04-17 19:27 0 Job name flag file
[ ]jp_oLBXZTU.align2015-04-17 22:35 28KPSIBLAST alignment in FASTA format
[TXT]jp_oLBXZTU.als2015-04-17 22:35 2.2KAlscript command file for PS/PDF output
[ ]jp_oLBXZTU.blast.gz2015-04-17 22:34 64KCompressed PSIBLAST output file
[TXT]jp_oLBXZTU.coils.csv2015-04-17 22:35 1.0KCOILS output in CSV format
[ ]jp_oLBXZTU.coilseq.lupas_142015-04-17 22:35 6.9KCOILS output, window length 14
[ ]jp_oLBXZTU.coilseq.lupas_212015-04-17 22:35 6.9KCOILS output, window length 21
[ ]jp_oLBXZTU.coilseq.lupas_282015-04-17 22:35 6.9KCOILS output, window length 28
[ ]jp_oLBXZTU.concise2015-04-17 22:35 61KPrediction: coiled-coil, solvent, alignment
[ ]jp_oLBXZTU.concise.blc2015-04-17 22:35 30KBLC format prediction and alignment data
[ ]jp_oLBXZTU.concise.fasta2015-04-17 22:35 30KPrediction: coiled-coil, solvent, alignment
[ ]jp_oLBXZTU.concise.pdf2015-04-17 22:35 193KPDF prediction and alignment data
[ ]jp_oLBXZTU.concise.ps2015-04-17 22:35 3.5MPrediction: coiled-coil, solvent, alignment
[ ]jp_oLBXZTU.fasta2015-04-17 22:02 180 Input query sequence in FASTA format
[ ]jp_oLBXZTU.full_MSA.fasta2015-04-17 22:34 98KFull MSA before JPred filters in FASTA
[TXT]jp_oLBXZTU.full_MSA.fasta.noGaps.html2015-04-17 22:35 72KFull MSA before JPred filters in FASTA
[TXT]jp_oLBXZTU.full_MSA.fasta.withGaps.html2015-04-17 22:35 422KFull MSA before JPred filters in FASTA
[ ]jp_oLBXZTU.hmm2015-04-17 22:35 31KHHMer2 profile of the alignment
[TXT]jp_oLBXZTU.html2015-04-17 22:35 76KHTML prediction and alignment data
[ ]jp_oLBXZTU.input2015-04-17 19:27 172 Raw input data for analysis
[ ]jp_oLBXZTU.jalview2015-04-17 22:35 4.2KJalview annotation file for alignment
[ ]jp_oLBXZTU.jnet2015-04-17 22:35 6.1KJnet secondary structure output
[TXT]jp_oLBXZTU.profile2015-04-17 22:30 27KPSIBLAST profile from alignment
[ ]jp_oLBXZTU.pssm2015-04-17 22:35 35KPSIBLAST PSSM for Jnet
[TXT]jp_oLBXZTU.results.html2016-02-15 12:20 74KJPred results page
[TXT]jp_oLBXZTU.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_oLBXZTU.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_oLBXZTU.seq2015-04-17 19:27 180 Sequence data file
[TXT]jp_oLBXZTU.simple.html2015-04-17 22:35 1.4KBrief HTML: sequence and prediction only
[TXT]jp_oLBXZTU.svg.html2015-04-17 22:35 66KJalview SVG summary of results
[ ]jp_oLBXZTU.tar.gz2015-04-17 22:35 385KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.