A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 21:02 | 4.7K | JPred server log file |
| README | 2016-02-15 12:21 | 2.1K | Results file descriptions |
| d3c9ua2.name | 2015-04-17 18:50 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_3mBscP4.align | 2015-04-17 21:01 | 205K | PSIBLAST alignment in FASTA format |
| jp_3mBscP4.als | 2015-04-17 21:01 | 3.0K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_3mBscP4.blast.gz | 2015-04-17 21:00 | 5.5M | Compressed PSIBLAST output file |
| jp_3mBscP4.coils.csv | 2015-04-17 21:01 | 1.0K | COILS output in CSV format |
| jp_3mBscP4.coilseq.lupas_14 | 2015-04-17 21:01 | 7.1K | COILS output, window length 14 |
| jp_3mBscP4.coilseq.lupas_21 | 2015-04-17 21:01 | 7.1K | COILS output, window length 21 |
| jp_3mBscP4.coilseq.lupas_28 | 2015-04-17 21:01 | 7.1K | COILS output, window length 28 |
| jp_3mBscP4.concise | 2015-04-17 21:01 | 400K | Prediction: coiled-coil, solvent, alignment |
| jp_3mBscP4.concise.blc | 2015-04-17 21:01 | 204K | BLC format prediction and alignment data |
| jp_3mBscP4.concise.fasta | 2015-04-17 21:01 | 207K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_3mBscP4.concise.pdf | 2015-04-17 21:02 | 1.4M | PDF prediction and alignment data |
| jp_3mBscP4.concise.ps | 2015-04-17 21:01 | 25M | Prediction: coiled-coil, solvent, alignment |
| jp_3mBscP4.fasta | 2015-04-17 20:56 | 184 | Input query sequence in FASTA format |
| jp_3mBscP4.full_MSA.fasta | 2015-04-17 21:00 | 12M | Full MSA before JPred filters in FASTA |
| jp_3mBscP4.full_MSA.fasta.noGaps.html | 2015-04-17 21:02 | 1.4M | Full MSA before JPred filters in FASTA |
| jp_3mBscP4.full_MSA.fasta.withGaps.html | 2015-04-17 21:02 | 31M | Full MSA before JPred filters in FASTA |
| jp_3mBscP4.hmm | 2015-04-17 21:01 | 32K | HHMer2 profile of the alignment |
| jp_3mBscP4.html | 2015-04-17 21:01 | 433K | HTML prediction and alignment data |
| jp_3mBscP4.input | 2015-04-17 18:50 | 176 | Raw input data for analysis |
| jp_3mBscP4.jalview | 2015-04-17 21:01 | 4.2K | Jalview annotation file for alignment |
| jp_3mBscP4.jnet | 2015-04-17 21:01 | 6.2K | Jnet secondary structure output |
| jp_3mBscP4.profile | 2015-04-17 20:59 | 27K | PSIBLAST profile from alignment |
| jp_3mBscP4.pssm | 2015-04-17 21:01 | 36K | PSIBLAST PSSM for Jnet |
| jp_3mBscP4.results.html | 2016-02-15 12:21 | 77K | JPred results page |
| jp_3mBscP4.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_3mBscP4.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_3mBscP4.seq | 2015-04-17 18:50 | 184 | Sequence data file |
| jp_3mBscP4.simple.html | 2015-04-17 21:01 | 1.4K | Brief HTML: sequence and prediction only |
![[TXT]](jp_3mBscP4.svg.html) | jp_3mBscP4.svg.html | 2015-04-17 21:02 | 69K | Jalview SVG summary of results |
| jp_3mBscP4.tar.gz | 2015-04-17 21:02 | 10M | Archive containing complete results |
