JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:58 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3ci0k1.name2015-04-17 18:51 0 Job name flag file
[ ]jp_iFzDrIx.align2015-04-17 20:58 18KPSIBLAST alignment in FASTA format
[TXT]jp_iFzDrIx.als2015-04-17 20:58 1.6KAlscript command file for PS/PDF output
[ ]jp_iFzDrIx.blast.gz2015-04-17 20:58 45KCompressed PSIBLAST output file
[TXT]jp_iFzDrIx.coils.csv2015-04-17 20:58 414 COILS output in CSV format
[ ]jp_iFzDrIx.coilseq.lupas_142015-04-17 20:58 2.7KCOILS output, window length 14
[ ]jp_iFzDrIx.coilseq.lupas_212015-04-17 20:58 2.7KCOILS output, window length 21
[ ]jp_iFzDrIx.coilseq.lupas_282015-04-17 20:58 2.7KCOILS output, window length 28
[ ]jp_iFzDrIx.concise2015-04-17 20:58 36KPrediction: coiled-coil, solvent, alignment
[ ]jp_iFzDrIx.concise.blc2015-04-17 20:58 19KBLC format prediction and alignment data
[ ]jp_iFzDrIx.concise.fasta2015-04-17 20:58 19KPrediction: coiled-coil, solvent, alignment
[ ]jp_iFzDrIx.concise.pdf2015-04-17 20:58 109KPDF prediction and alignment data
[ ]jp_iFzDrIx.concise.ps2015-04-17 20:58 1.9MPrediction: coiled-coil, solvent, alignment
[ ]jp_iFzDrIx.fasta2015-04-17 20:56 77 Input query sequence in FASTA format
[ ]jp_iFzDrIx.full_MSA.fasta2015-04-17 20:58 62KFull MSA before JPred filters in FASTA
[TXT]jp_iFzDrIx.full_MSA.fasta.noGaps.html2015-04-17 20:58 54KFull MSA before JPred filters in FASTA
[TXT]jp_iFzDrIx.full_MSA.fasta.withGaps.html2015-04-17 20:58 305KFull MSA before JPred filters in FASTA
[ ]jp_iFzDrIx.hmm2015-04-17 20:58 12KHHMer2 profile of the alignment
[TXT]jp_iFzDrIx.html2015-04-17 20:58 67KHTML prediction and alignment data
[ ]jp_iFzDrIx.input2015-04-17 18:51 71 Raw input data for analysis
[ ]jp_iFzDrIx.jalview2015-04-17 20:58 2.1KJalview annotation file for alignment
[ ]jp_iFzDrIx.jnet2015-04-17 20:58 2.4KJnet secondary structure output
[TXT]jp_iFzDrIx.profile2015-04-17 20:58 11KPSIBLAST profile from alignment
[ ]jp_iFzDrIx.pssm2015-04-17 20:58 14KPSIBLAST PSSM for Jnet
[TXT]jp_iFzDrIx.results.html2016-02-15 12:21 36KJPred results page
[TXT]jp_iFzDrIx.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_iFzDrIx.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_iFzDrIx.seq2015-04-17 18:51 77 Sequence data file
[TXT]jp_iFzDrIx.simple.html2015-04-17 20:58 1.0KBrief HTML: sequence and prediction only
[TXT]jp_iFzDrIx.svg.html2015-04-17 20:58 28KJalview SVG summary of results
[ ]jp_iFzDrIx.tar.gz2015-04-17 20:58 234KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.