JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:06 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3ci3a_.name2015-04-17 18:51 0 Job name flag file
[ ]jp_YwvxF6i.align2015-04-17 21:05 177KPSIBLAST alignment in FASTA format
[TXT]jp_YwvxF6i.als2015-04-17 21:05 2.7KAlscript command file for PS/PDF output
[ ]jp_YwvxF6i.blast.gz2015-04-17 21:03 1.9MCompressed PSIBLAST output file
[TXT]jp_YwvxF6i.coils.csv2015-04-17 21:05 1.1KCOILS output in CSV format
[ ]jp_YwvxF6i.coilseq.lupas_142015-04-17 21:05 7.9KCOILS output, window length 14
[ ]jp_YwvxF6i.coilseq.lupas_212015-04-17 21:05 7.9KCOILS output, window length 21
[ ]jp_YwvxF6i.coilseq.lupas_282015-04-17 21:05 7.9KCOILS output, window length 28
[ ]jp_YwvxF6i.concise2015-04-17 21:05 348KPrediction: coiled-coil, solvent, alignment
[ ]jp_YwvxF6i.concise.blc2015-04-17 21:05 177KBLC format prediction and alignment data
[ ]jp_YwvxF6i.concise.fasta2015-04-17 21:05 179KPrediction: coiled-coil, solvent, alignment
[ ]jp_YwvxF6i.concise.pdf2015-04-17 21:05 1.2MPDF prediction and alignment data
[ ]jp_YwvxF6i.concise.ps2015-04-17 21:05 22MPrediction: coiled-coil, solvent, alignment
[ ]jp_YwvxF6i.fasta2015-04-17 20:58 203 Input query sequence in FASTA format
[ ]jp_YwvxF6i.full_MSA.fasta2015-04-17 21:04 3.1MFull MSA before JPred filters in FASTA
[TXT]jp_YwvxF6i.full_MSA.fasta.noGaps.html2015-04-17 21:05 763KFull MSA before JPred filters in FASTA
[TXT]jp_YwvxF6i.full_MSA.fasta.withGaps.html2015-04-17 21:05 11MFull MSA before JPred filters in FASTA
[ ]jp_YwvxF6i.hmm2015-04-17 21:05 35KHHMer2 profile of the alignment
[TXT]jp_YwvxF6i.html2015-04-17 21:05 362KHTML prediction and alignment data
[ ]jp_YwvxF6i.input2015-04-17 18:51 195 Raw input data for analysis
[ ]jp_YwvxF6i.jalview2015-04-17 21:05 4.6KJalview annotation file for alignment
[ ]jp_YwvxF6i.jnet2015-04-17 21:05 6.9KJnet secondary structure output
[TXT]jp_YwvxF6i.profile2015-04-17 21:02 30KPSIBLAST profile from alignment
[ ]jp_YwvxF6i.pssm2015-04-17 21:05 40KPSIBLAST PSSM for Jnet
[TXT]jp_YwvxF6i.results.html2016-02-15 12:21 83KJPred results page
[TXT]jp_YwvxF6i.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_YwvxF6i.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_YwvxF6i.seq2015-04-17 18:51 203 Sequence data file
[TXT]jp_YwvxF6i.simple.html2015-04-17 21:05 1.5KBrief HTML: sequence and prediction only
[TXT]jp_YwvxF6i.svg.html2015-04-17 21:06 75KJalview SVG summary of results
[ ]jp_YwvxF6i.tar.gz2015-04-17 21:06 4.5MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.