JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:09 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3cu9a_.name2015-04-17 18:13 0 Job name flag file
[ ]jp_LQnuhmD.align2015-04-17 20:07 298KPSIBLAST alignment in FASTA format
[TXT]jp_LQnuhmD.als2015-04-17 20:08 4.4KAlscript command file for PS/PDF output
[ ]jp_LQnuhmD.blast.gz2015-04-17 20:05 19MCompressed PSIBLAST output file
[TXT]jp_LQnuhmD.coils.csv2015-04-17 20:08 1.9KCOILS output in CSV format
[ ]jp_LQnuhmD.coilseq.lupas_142015-04-17 20:08 13KCOILS output, window length 14
[ ]jp_LQnuhmD.coilseq.lupas_212015-04-17 20:08 13KCOILS output, window length 21
[ ]jp_LQnuhmD.coilseq.lupas_282015-04-17 20:08 13KCOILS output, window length 28
[ ]jp_LQnuhmD.concise2015-04-17 20:08 592KPrediction: coiled-coil, solvent, alignment
[ ]jp_LQnuhmD.concise.blc2015-04-17 20:08 299KBLC format prediction and alignment data
[ ]jp_LQnuhmD.concise.fasta2015-04-17 20:08 301KPrediction: coiled-coil, solvent, alignment
[ ]jp_LQnuhmD.concise.pdf2015-04-17 20:08 2.0MPDF prediction and alignment data
[ ]jp_LQnuhmD.concise.ps2015-04-17 20:08 37MPrediction: coiled-coil, solvent, alignment
[ ]jp_LQnuhmD.fasta2015-04-17 19:58 331 Input query sequence in FASTA format
[ ]jp_LQnuhmD.full_MSA.fasta2015-04-17 20:06 37MFull MSA before JPred filters in FASTA
[TXT]jp_LQnuhmD.full_MSA.fasta.noGaps.html2015-04-17 20:09 2.6MFull MSA before JPred filters in FASTA
[TXT]jp_LQnuhmD.full_MSA.fasta.withGaps.html2015-04-17 20:09 82MFull MSA before JPred filters in FASTA
[ ]jp_LQnuhmD.hmm2015-04-17 20:08 59KHHMer2 profile of the alignment
[TXT]jp_LQnuhmD.html2015-04-17 20:08 494KHTML prediction and alignment data
[ ]jp_LQnuhmD.input2015-04-17 18:13 321 Raw input data for analysis
[ ]jp_LQnuhmD.jalview2015-04-17 20:08 6.9KJalview annotation file for alignment
[ ]jp_LQnuhmD.jnet2015-04-17 20:08 11KJnet secondary structure output
[TXT]jp_LQnuhmD.profile2015-04-17 20:04 50KPSIBLAST profile from alignment
[ ]jp_LQnuhmD.pssm2015-04-17 20:07 67KPSIBLAST PSSM for Jnet
[TXT]jp_LQnuhmD.results.html2016-02-15 12:21 130KJPred results page
[TXT]jp_LQnuhmD.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_LQnuhmD.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_LQnuhmD.seq2015-04-17 18:13 331 Sequence data file
[TXT]jp_LQnuhmD.simple.html2015-04-17 20:08 2.0KBrief HTML: sequence and prediction only
[TXT]jp_LQnuhmD.svg.html2015-04-17 20:09 122KJalview SVG summary of results
[ ]jp_LQnuhmD.tar.gz2015-04-17 20:09 30MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.