JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:08 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3d3ba_.name2015-04-17 18:14 0 Job name flag file
[ ]jp_851s9iG.align2015-04-17 20:07 137KPSIBLAST alignment in FASTA format
[TXT]jp_851s9iG.als2015-04-17 20:07 2.1KAlscript command file for PS/PDF output
[ ]jp_851s9iG.blast.gz2015-04-17 20:06 3.9MCompressed PSIBLAST output file
[TXT]jp_851s9iG.coils.csv2015-04-17 20:07 864 COILS output in CSV format
[ ]jp_851s9iG.coilseq.lupas_142015-04-17 20:07 5.8KCOILS output, window length 14
[ ]jp_851s9iG.coilseq.lupas_212015-04-17 20:07 5.8KCOILS output, window length 21
[ ]jp_851s9iG.coilseq.lupas_282015-04-17 20:07 5.8KCOILS output, window length 28
[ ]jp_851s9iG.concise2015-04-17 20:07 269KPrediction: coiled-coil, solvent, alignment
[ ]jp_851s9iG.concise.blc2015-04-17 20:07 138KBLC format prediction and alignment data
[ ]jp_851s9iG.concise.fasta2015-04-17 20:07 139KPrediction: coiled-coil, solvent, alignment
[ ]jp_851s9iG.concise.pdf2015-04-17 20:07 949KPDF prediction and alignment data
[ ]jp_851s9iG.concise.ps2015-04-17 20:07 16MPrediction: coiled-coil, solvent, alignment
[ ]jp_851s9iG.fasta2015-04-17 19:59 153 Input query sequence in FASTA format
[ ]jp_851s9iG.full_MSA.fasta2015-04-17 20:06 8.1MFull MSA before JPred filters in FASTA
[TXT]jp_851s9iG.full_MSA.fasta.noGaps.html2015-04-17 20:07 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_851s9iG.full_MSA.fasta.withGaps.html2015-04-17 20:07 25MFull MSA before JPred filters in FASTA
[ ]jp_851s9iG.hmm2015-04-17 20:07 26KHHMer2 profile of the alignment
[TXT]jp_851s9iG.html2015-04-17 20:07 323KHTML prediction and alignment data
[ ]jp_851s9iG.input2015-04-17 18:14 146 Raw input data for analysis
[ ]jp_851s9iG.jalview2015-04-17 20:07 3.7KJalview annotation file for alignment
[ ]jp_851s9iG.jnet2015-04-17 20:07 5.1KJnet secondary structure output
[TXT]jp_851s9iG.profile2015-04-17 20:04 23KPSIBLAST profile from alignment
[ ]jp_851s9iG.pssm2015-04-17 20:07 30KPSIBLAST PSSM for Jnet
[TXT]jp_851s9iG.results.html2016-02-15 12:21 64KJPred results page
[TXT]jp_851s9iG.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_851s9iG.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_851s9iG.seq2015-04-17 18:14 153 Sequence data file
[TXT]jp_851s9iG.simple.html2015-04-17 20:07 1.3KBrief HTML: sequence and prediction only
[TXT]jp_851s9iG.svg.html2015-04-17 20:08 56KJalview SVG summary of results
[ ]jp_851s9iG.tar.gz2015-04-17 20:08 7.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.