JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]d3db7a_.name2015-04-17 15:47 0 Job name flag file
[ ]jp_Llmd4mR.input2015-04-17 15:47 134 Raw input data for analysis
[ ]jp_Llmd4mR.fasta2015-04-17 16:00 141 Input query sequence in FASTA format
[ ]jp_Llmd4mR.seq2015-04-17 15:47 141 Sequence data file
[TXT]jp_Llmd4mR.coils.csv2015-04-17 16:06 792 COILS output in CSV format
[TXT]jp_Llmd4mR.simple.html2015-04-17 16:06 1.4KBrief HTML: sequence and prediction only
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]jp_Llmd4mR.als2015-04-17 16:06 2.7KAlscript command file for PS/PDF output
[ ]jp_Llmd4mR.jalview2015-04-17 16:06 3.4KJalview annotation file for alignment
[ ]jp_Llmd4mR.jnet2015-04-17 16:06 4.7KJnet secondary structure output
[TXT]LOG2015-04-17 16:06 4.7KJPred server log file
[ ]jp_Llmd4mR.coilseq.lupas_142015-04-17 16:06 5.3KCOILS output, window length 14
[ ]jp_Llmd4mR.coilseq.lupas_212015-04-17 16:06 5.3KCOILS output, window length 21
[ ]jp_Llmd4mR.coilseq.lupas_282015-04-17 16:06 5.3KCOILS output, window length 28
[TXT]jp_Llmd4mR.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_Llmd4mR.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[TXT]jp_Llmd4mR.profile2015-04-17 16:04 21KPSIBLAST profile from alignment
[ ]jp_Llmd4mR.hmm2015-04-17 16:06 24KHHMer2 profile of the alignment
[ ]jp_Llmd4mR.pssm2015-04-17 16:06 27KPSIBLAST PSSM for Jnet
[TXT]jp_Llmd4mR.svg.html2015-04-17 16:06 52KJalview SVG summary of results
[TXT]jp_Llmd4mR.results.html2016-02-15 12:21 60KJPred results page
[ ]jp_Llmd4mR.align2015-04-17 16:06 93KPSIBLAST alignment in FASTA format
[ ]jp_Llmd4mR.concise.blc2015-04-17 16:06 94KBLC format prediction and alignment data
[ ]jp_Llmd4mR.concise.fasta2015-04-17 16:06 95KPrediction: coiled-coil, solvent, alignment
[ ]jp_Llmd4mR.concise2015-04-17 16:06 183KPrediction: coiled-coil, solvent, alignment
[TXT]jp_Llmd4mR.full_MSA.fasta.noGaps.html2015-04-17 16:06 218KFull MSA before JPred filters in FASTA
[TXT]jp_Llmd4mR.html2015-04-17 16:06 229KHTML prediction and alignment data
[ ]jp_Llmd4mR.blast.gz2015-04-17 16:05 329KCompressed PSIBLAST output file
[ ]jp_Llmd4mR.concise.pdf2015-04-17 16:06 572KPDF prediction and alignment data
[ ]jp_Llmd4mR.full_MSA.fasta2015-04-17 16:05 745KFull MSA before JPred filters in FASTA
[ ]jp_Llmd4mR.tar.gz2015-04-17 16:06 1.3MArchive containing complete results
[TXT]jp_Llmd4mR.full_MSA.fasta.withGaps.html2015-04-17 16:06 3.2MFull MSA before JPred filters in FASTA
[ ]jp_Llmd4mR.concise.ps2015-04-17 16:06 11MPrediction: coiled-coil, solvent, alignment
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.