JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:05 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3ddta_.name2015-04-17 17:02 0 Job name flag file
[ ]jp_2b6YQp7.align2015-04-17 18:05 36KPSIBLAST alignment in FASTA format
[TXT]jp_2b6YQp7.als2015-04-17 18:05 1.7KAlscript command file for PS/PDF output
[ ]jp_2b6YQp7.blast.gz2015-04-17 18:05 343KCompressed PSIBLAST output file
[TXT]jp_2b6YQp7.coils.csv2015-04-17 18:05 318 COILS output in CSV format
[ ]jp_2b6YQp7.coilseq.lupas_142015-04-17 18:05 2.0KCOILS output, window length 14
[ ]jp_2b6YQp7.coilseq.lupas_212015-04-17 18:05 2.0KCOILS output, window length 21
[ ]jp_2b6YQp7.coilseq.lupas_282015-04-17 18:05 2.0KCOILS output, window length 28
[ ]jp_2b6YQp7.concise2015-04-17 18:05 67KPrediction: coiled-coil, solvent, alignment
[ ]jp_2b6YQp7.concise.blc2015-04-17 18:05 36KBLC format prediction and alignment data
[ ]jp_2b6YQp7.concise.fasta2015-04-17 18:05 36KPrediction: coiled-coil, solvent, alignment
[ ]jp_2b6YQp7.concise.pdf2015-04-17 18:05 202KPDF prediction and alignment data
[ ]jp_2b6YQp7.concise.ps2015-04-17 18:05 3.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_2b6YQp7.fasta2015-04-17 18:03 61 Input query sequence in FASTA format
[ ]jp_2b6YQp7.full_MSA.fasta2015-04-17 18:05 882KFull MSA before JPred filters in FASTA
[TXT]jp_2b6YQp7.full_MSA.fasta.noGaps.html2015-04-17 18:05 766KFull MSA before JPred filters in FASTA
[TXT]jp_2b6YQp7.full_MSA.fasta.withGaps.html2015-04-17 18:05 4.6MFull MSA before JPred filters in FASTA
[ ]jp_2b6YQp7.hmm2015-04-17 18:05 9.0KHHMer2 profile of the alignment
[TXT]jp_2b6YQp7.html2015-04-17 18:05 144KHTML prediction and alignment data
[ ]jp_2b6YQp7.input2015-04-17 17:02 55 Raw input data for analysis
[ ]jp_2b6YQp7.jalview2015-04-17 18:05 1.8KJalview annotation file for alignment
[ ]jp_2b6YQp7.jnet2015-04-17 18:05 1.8KJnet secondary structure output
[TXT]jp_2b6YQp7.profile2015-04-17 18:04 8.1KPSIBLAST profile from alignment
[ ]jp_2b6YQp7.pssm2015-04-17 18:05 10KPSIBLAST PSSM for Jnet
[TXT]jp_2b6YQp7.results.html2016-02-15 12:21 29KJPred results page
[TXT]jp_2b6YQp7.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_2b6YQp7.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_2b6YQp7.seq2015-04-17 17:02 61 Sequence data file
[TXT]jp_2b6YQp7.simple.html2015-04-17 18:05 1.0KBrief HTML: sequence and prediction only
[TXT]jp_2b6YQp7.svg.html2015-04-17 18:05 21KJalview SVG summary of results
[ ]jp_2b6YQp7.tar.gz2015-04-17 18:05 1.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.