JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:04 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3dnfa_.name2015-04-17 18:51 0 Job name flag file
[ ]jp__TlOUVz.align2015-04-17 21:04 188KPSIBLAST alignment in FASTA format
[TXT]jp__TlOUVz.als2015-04-17 21:04 4.5KAlscript command file for PS/PDF output
[ ]jp__TlOUVz.blast.gz2015-04-17 21:03 4.3MCompressed PSIBLAST output file
[TXT]jp__TlOUVz.coils.csv2015-04-17 21:04 1.7KCOILS output in CSV format
[ ]jp__TlOUVz.coilseq.lupas_142015-04-17 21:04 12KCOILS output, window length 14
[ ]jp__TlOUVz.coilseq.lupas_212015-04-17 21:04 12KCOILS output, window length 21
[ ]jp__TlOUVz.coilseq.lupas_282015-04-17 21:04 12KCOILS output, window length 28
[ ]jp__TlOUVz.concise2015-04-17 21:04 377KPrediction: coiled-coil, solvent, alignment
[ ]jp__TlOUVz.concise.blc2015-04-17 21:04 190KBLC format prediction and alignment data
[ ]jp__TlOUVz.concise.fasta2015-04-17 21:04 191KPrediction: coiled-coil, solvent, alignment
[ ]jp__TlOUVz.concise.pdf2015-04-17 21:04 1.3MPDF prediction and alignment data
[ ]jp__TlOUVz.concise.ps2015-04-17 21:04 24MPrediction: coiled-coil, solvent, alignment
[ ]jp__TlOUVz.fasta2015-04-17 20:58 297 Input query sequence in FASTA format
[ ]jp__TlOUVz.full_MSA.fasta2015-04-17 21:03 7.7MFull MSA before JPred filters in FASTA
[TXT]jp__TlOUVz.full_MSA.fasta.noGaps.html2015-04-17 21:04 1.2MFull MSA before JPred filters in FASTA
[TXT]jp__TlOUVz.full_MSA.fasta.withGaps.html2015-04-17 21:04 20MFull MSA before JPred filters in FASTA
[ ]jp__TlOUVz.hmm2015-04-17 21:04 53KHHMer2 profile of the alignment
[TXT]jp__TlOUVz.html2015-04-17 21:04 337KHTML prediction and alignment data
[ ]jp__TlOUVz.input2015-04-17 18:51 288 Raw input data for analysis
[ ]jp__TlOUVz.jalview2015-04-17 21:04 6.5KJalview annotation file for alignment
[ ]jp__TlOUVz.jnet2015-04-17 21:04 10KJnet secondary structure output
[TXT]jp__TlOUVz.profile2015-04-17 21:02 45KPSIBLAST profile from alignment
[ ]jp__TlOUVz.pssm2015-04-17 21:04 60KPSIBLAST PSSM for Jnet
[TXT]jp__TlOUVz.results.html2016-02-15 12:21 123KJPred results page
[TXT]jp__TlOUVz.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp__TlOUVz.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp__TlOUVz.seq2015-04-17 18:51 297 Sequence data file
[TXT]jp__TlOUVz.simple.html2015-04-17 21:04 1.9KBrief HTML: sequence and prediction only
[TXT]jp__TlOUVz.svg.html2015-04-17 21:04 115KJalview SVG summary of results
[ ]jp__TlOUVz.tar.gz2015-04-17 21:04 8.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.