JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:04 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3eeqa2.name2015-04-17 17:39 0 Job name flag file
[ ]jp_I6jWUfB.align2015-04-17 19:04 204KPSIBLAST alignment in FASTA format
[TXT]jp_I6jWUfB.als2015-04-17 19:04 3.9KAlscript command file for PS/PDF output
[ ]jp_I6jWUfB.blast.gz2015-04-17 19:03 1.0MCompressed PSIBLAST output file
[TXT]jp_I6jWUfB.coils.csv2015-04-17 19:04 1.2KCOILS output in CSV format
[ ]jp_I6jWUfB.coilseq.lupas_142015-04-17 19:04 8.2KCOILS output, window length 14
[ ]jp_I6jWUfB.coilseq.lupas_212015-04-17 19:04 8.2KCOILS output, window length 21
[ ]jp_I6jWUfB.coilseq.lupas_282015-04-17 19:04 8.2KCOILS output, window length 28
[ ]jp_I6jWUfB.concise2015-04-17 19:04 402KPrediction: coiled-coil, solvent, alignment
[ ]jp_I6jWUfB.concise.blc2015-04-17 19:04 204KBLC format prediction and alignment data
[ ]jp_I6jWUfB.concise.fasta2015-04-17 19:04 206KPrediction: coiled-coil, solvent, alignment
[ ]jp_I6jWUfB.concise.pdf2015-04-17 19:04 1.4MPDF prediction and alignment data
[ ]jp_I6jWUfB.concise.ps2015-04-17 19:04 25MPrediction: coiled-coil, solvent, alignment
[ ]jp_I6jWUfB.fasta2015-04-17 19:00 211 Input query sequence in FASTA format
[ ]jp_I6jWUfB.full_MSA.fasta2015-04-17 19:03 2.2MFull MSA before JPred filters in FASTA
[TXT]jp_I6jWUfB.full_MSA.fasta.noGaps.html2015-04-17 19:04 394KFull MSA before JPred filters in FASTA
[TXT]jp_I6jWUfB.full_MSA.fasta.withGaps.html2015-04-17 19:04 6.7MFull MSA before JPred filters in FASTA
[ ]jp_I6jWUfB.hmm2015-04-17 19:04 37KHHMer2 profile of the alignment
[TXT]jp_I6jWUfB.html2015-04-17 19:04 408KHTML prediction and alignment data
[ ]jp_I6jWUfB.input2015-04-17 17:39 203 Raw input data for analysis
[ ]jp_I6jWUfB.jalview2015-04-17 19:04 4.8KJalview annotation file for alignment
[ ]jp_I6jWUfB.jnet2015-04-17 19:04 7.2KJnet secondary structure output
[TXT]jp_I6jWUfB.profile2015-04-17 19:02 32KPSIBLAST profile from alignment
[ ]jp_I6jWUfB.pssm2015-04-17 19:04 42KPSIBLAST PSSM for Jnet
[TXT]jp_I6jWUfB.results.html2016-02-15 12:21 90KJPred results page
[TXT]jp_I6jWUfB.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_I6jWUfB.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_I6jWUfB.seq2015-04-17 17:39 211 Sequence data file
[TXT]jp_I6jWUfB.simple.html2015-04-17 19:04 1.7KBrief HTML: sequence and prediction only
[TXT]jp_I6jWUfB.svg.html2015-04-17 19:04 82KJalview SVG summary of results
[ ]jp_I6jWUfB.tar.gz2015-04-17 19:04 3.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.