JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:52 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3epwa_.name2015-04-17 18:51 0 Job name flag file
[ ]jp_qEojSVF.align2015-04-17 21:50 358KPSIBLAST alignment in FASTA format
[TXT]jp_qEojSVF.als2015-04-17 21:50 4.6KAlscript command file for PS/PDF output
[ ]jp_qEojSVF.blast.gz2015-04-17 21:47 8.6MCompressed PSIBLAST output file
[TXT]jp_qEojSVF.coils.csv2015-04-17 21:50 1.9KCOILS output in CSV format
[ ]jp_qEojSVF.coilseq.lupas_142015-04-17 21:50 14KCOILS output, window length 14
[ ]jp_qEojSVF.coilseq.lupas_212015-04-17 21:50 14KCOILS output, window length 21
[ ]jp_qEojSVF.coilseq.lupas_282015-04-17 21:50 14KCOILS output, window length 28
[ ]jp_qEojSVF.concise2015-04-17 21:50 711KPrediction: coiled-coil, solvent, alignment
[ ]jp_qEojSVF.concise.blc2015-04-17 21:50 358KBLC format prediction and alignment data
[ ]jp_qEojSVF.concise.fasta2015-04-17 21:50 362KPrediction: coiled-coil, solvent, alignment
[ ]jp_qEojSVF.concise.pdf2015-04-17 21:51 2.7MPDF prediction and alignment data
[ ]jp_qEojSVF.concise.ps2015-04-17 21:50 46MPrediction: coiled-coil, solvent, alignment
[ ]jp_qEojSVF.fasta2015-04-17 20:58 343 Input query sequence in FASTA format
[ ]jp_qEojSVF.full_MSA.fasta2015-04-17 21:48 19MFull MSA before JPred filters in FASTA
[TXT]jp_qEojSVF.full_MSA.fasta.noGaps.html2015-04-17 21:51 1.7MFull MSA before JPred filters in FASTA
[TXT]jp_qEojSVF.full_MSA.fasta.withGaps.html2015-04-17 21:51 45MFull MSA before JPred filters in FASTA
[ ]jp_qEojSVF.hmm2015-04-17 21:50 61KHHMer2 profile of the alignment
[TXT]jp_qEojSVF.html2015-04-17 21:50 589KHTML prediction and alignment data
[ ]jp_qEojSVF.input2015-04-17 18:51 333 Raw input data for analysis
[ ]jp_qEojSVF.jalview2015-04-17 21:50 7.3KJalview annotation file for alignment
[ ]jp_qEojSVF.jnet2015-04-17 21:50 12KJnet secondary structure output
[TXT]jp_qEojSVF.profile2015-04-17 21:35 52KPSIBLAST profile from alignment
[ ]jp_qEojSVF.pssm2015-04-17 21:50 70KPSIBLAST PSSM for Jnet
[TXT]jp_qEojSVF.results.html2016-02-15 12:21 139KJPred results page
[TXT]jp_qEojSVF.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_qEojSVF.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_qEojSVF.seq2015-04-17 18:51 343 Sequence data file
[TXT]jp_qEojSVF.simple.html2015-04-17 21:50 2.0KBrief HTML: sequence and prediction only
[TXT]jp_qEojSVF.svg.html2015-04-17 21:51 130KJalview SVG summary of results
[ ]jp_qEojSVF.tar.gz2015-04-17 21:52 17MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.