JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:51 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3f0da_.name2015-04-17 17:02 0 Job name flag file
[ ]jp_WkPuBJf.align2015-04-17 18:50 151KPSIBLAST alignment in FASTA format
[TXT]jp_WkPuBJf.als2015-04-17 18:50 2.6KAlscript command file for PS/PDF output
[ ]jp_WkPuBJf.blast.gz2015-04-17 18:49 1.2MCompressed PSIBLAST output file
[TXT]jp_WkPuBJf.coils.csv2015-04-17 18:50 960 COILS output in CSV format
[ ]jp_WkPuBJf.coilseq.lupas_142015-04-17 18:50 6.5KCOILS output, window length 14
[ ]jp_WkPuBJf.coilseq.lupas_212015-04-17 18:50 6.5KCOILS output, window length 21
[ ]jp_WkPuBJf.coilseq.lupas_282015-04-17 18:50 6.5KCOILS output, window length 28
[ ]jp_WkPuBJf.concise2015-04-17 18:50 295KPrediction: coiled-coil, solvent, alignment
[ ]jp_WkPuBJf.concise.blc2015-04-17 18:50 151KBLC format prediction and alignment data
[ ]jp_WkPuBJf.concise.fasta2015-04-17 18:50 153KPrediction: coiled-coil, solvent, alignment
[ ]jp_WkPuBJf.concise.pdf2015-04-17 18:51 1.0MPDF prediction and alignment data
[ ]jp_WkPuBJf.concise.ps2015-04-17 18:50 18MPrediction: coiled-coil, solvent, alignment
[ ]jp_WkPuBJf.fasta2015-04-17 18:04 170 Input query sequence in FASTA format
[ ]jp_WkPuBJf.full_MSA.fasta2015-04-17 18:49 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_WkPuBJf.full_MSA.fasta.noGaps.html2015-04-17 18:51 848KFull MSA before JPred filters in FASTA
[TXT]jp_WkPuBJf.full_MSA.fasta.withGaps.html2015-04-17 18:51 6.9MFull MSA before JPred filters in FASTA
[ ]jp_WkPuBJf.hmm2015-04-17 18:50 29KHHMer2 profile of the alignment
[TXT]jp_WkPuBJf.html2015-04-17 18:50 335KHTML prediction and alignment data
[ ]jp_WkPuBJf.input2015-04-17 17:02 162 Raw input data for analysis
[ ]jp_WkPuBJf.jalview2015-04-17 18:50 3.9KJalview annotation file for alignment
[ ]jp_WkPuBJf.jnet2015-04-17 18:50 5.7KJnet secondary structure output
[TXT]jp_WkPuBJf.profile2015-04-17 18:40 25KPSIBLAST profile from alignment
[ ]jp_WkPuBJf.pssm2015-04-17 18:50 33KPSIBLAST PSSM for Jnet
[TXT]jp_WkPuBJf.results.html2016-02-15 12:21 70KJPred results page
[TXT]jp_WkPuBJf.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_WkPuBJf.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_WkPuBJf.seq2015-04-17 17:02 170 Sequence data file
[TXT]jp_WkPuBJf.simple.html2015-04-17 18:50 1.4KBrief HTML: sequence and prediction only
[TXT]jp_WkPuBJf.svg.html2015-04-17 18:51 62KJalview SVG summary of results
[ ]jp_WkPuBJf.tar.gz2015-04-17 18:51 3.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.