A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:04 | 4.7K | JPred server log file |
| README | 2016-02-15 12:21 | 2.1K | Results file descriptions |
| d3f0pa2.name | 2015-04-17 18:14 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_nM1qpRG.align | 2015-04-17 20:03 | 29K | PSIBLAST alignment in FASTA format |
| jp_nM1qpRG.als | 2015-04-17 20:03 | 2.7K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_nM1qpRG.blast.gz | 2015-04-17 20:03 | 77K | Compressed PSIBLAST output file |
| jp_nM1qpRG.coils.csv | 2015-04-17 20:03 | 798 | COILS output in CSV format |
| jp_nM1qpRG.coilseq.lupas_14 | 2015-04-17 20:03 | 5.4K | COILS output, window length 14 |
| jp_nM1qpRG.coilseq.lupas_21 | 2015-04-17 20:03 | 5.4K | COILS output, window length 21 |
| jp_nM1qpRG.coilseq.lupas_28 | 2015-04-17 20:03 | 5.4K | COILS output, window length 28 |
| jp_nM1qpRG.concise | 2015-04-17 20:03 | 61K | Prediction: coiled-coil, solvent, alignment |
| jp_nM1qpRG.concise.blc | 2015-04-17 20:03 | 31K | BLC format prediction and alignment data |
| jp_nM1qpRG.concise.fasta | 2015-04-17 20:03 | 30K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_nM1qpRG.concise.pdf | 2015-04-17 20:03 | 208K | PDF prediction and alignment data |
| jp_nM1qpRG.concise.ps | 2015-04-17 20:03 | 3.5M | Prediction: coiled-coil, solvent, alignment |
| jp_nM1qpRG.fasta | 2015-04-17 20:01 | 142 | Input query sequence in FASTA format |
| jp_nM1qpRG.full_MSA.fasta | 2015-04-17 20:03 | 102K | Full MSA before JPred filters in FASTA |
| jp_nM1qpRG.full_MSA.fasta.noGaps.html | 2015-04-17 20:03 | 66K | Full MSA before JPred filters in FASTA |
| jp_nM1qpRG.full_MSA.fasta.withGaps.html | 2015-04-17 20:03 | 489K | Full MSA before JPred filters in FASTA |
| jp_nM1qpRG.hmm | 2015-04-17 20:03 | 24K | HHMer2 profile of the alignment |
| jp_nM1qpRG.html | 2015-04-17 20:03 | 82K | HTML prediction and alignment data |
| jp_nM1qpRG.input | 2015-04-17 18:14 | 135 | Raw input data for analysis |
| jp_nM1qpRG.jalview | 2015-04-17 20:03 | 3.4K | Jalview annotation file for alignment |
| jp_nM1qpRG.jnet | 2015-04-17 20:03 | 4.7K | Jnet secondary structure output |
| jp_nM1qpRG.profile | 2015-04-17 20:02 | 21K | PSIBLAST profile from alignment |
| jp_nM1qpRG.pssm | 2015-04-17 20:03 | 28K | PSIBLAST PSSM for Jnet |
| jp_nM1qpRG.results.html | 2016-02-15 12:21 | 61K | JPred results page |
| jp_nM1qpRG.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_nM1qpRG.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_nM1qpRG.seq | 2015-04-17 18:14 | 142 | Sequence data file |
| jp_nM1qpRG.simple.html | 2015-04-17 20:03 | 1.4K | Brief HTML: sequence and prediction only |
![[TXT]](jp_nM1qpRG.svg.html) | jp_nM1qpRG.svg.html | 2015-04-17 20:04 | 53K | Jalview SVG summary of results |
| jp_nM1qpRG.tar.gz | 2015-04-17 20:04 | 430K | Archive containing complete results |
