JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:54 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3g0ma_.name2015-04-17 17:02 0 Job name flag file
[ ]jp_KGyTsEs.align2015-04-17 18:53 157KPSIBLAST alignment in FASTA format
[TXT]jp_KGyTsEs.als2015-04-17 18:53 2.6KAlscript command file for PS/PDF output
[ ]jp_KGyTsEs.blast.gz2015-04-17 18:50 707KCompressed PSIBLAST output file
[TXT]jp_KGyTsEs.coils.csv2015-04-17 18:53 858 COILS output in CSV format
[ ]jp_KGyTsEs.coilseq.lupas_142015-04-17 18:53 5.8KCOILS output, window length 14
[ ]jp_KGyTsEs.coilseq.lupas_212015-04-17 18:53 5.8KCOILS output, window length 21
[ ]jp_KGyTsEs.coilseq.lupas_282015-04-17 18:53 5.8KCOILS output, window length 28
[ ]jp_KGyTsEs.concise2015-04-17 18:53 306KPrediction: coiled-coil, solvent, alignment
[ ]jp_KGyTsEs.concise.blc2015-04-17 18:53 157KBLC format prediction and alignment data
[ ]jp_KGyTsEs.concise.fasta2015-04-17 18:53 158KPrediction: coiled-coil, solvent, alignment
[ ]jp_KGyTsEs.concise.pdf2015-04-17 18:53 1.0MPDF prediction and alignment data
[ ]jp_KGyTsEs.concise.ps2015-04-17 18:53 19MPrediction: coiled-coil, solvent, alignment
[ ]jp_KGyTsEs.fasta2015-04-17 18:04 152 Input query sequence in FASTA format
[ ]jp_KGyTsEs.full_MSA.fasta2015-04-17 18:50 918KFull MSA before JPred filters in FASTA
[TXT]jp_KGyTsEs.full_MSA.fasta.noGaps.html2015-04-17 18:53 488KFull MSA before JPred filters in FASTA
[TXT]jp_KGyTsEs.full_MSA.fasta.withGaps.html2015-04-17 18:53 4.9MFull MSA before JPred filters in FASTA
[ ]jp_KGyTsEs.hmm2015-04-17 18:53 26KHHMer2 profile of the alignment
[TXT]jp_KGyTsEs.html2015-04-17 18:53 366KHTML prediction and alignment data
[ ]jp_KGyTsEs.input2015-04-17 17:02 145 Raw input data for analysis
[ ]jp_KGyTsEs.jalview2015-04-17 18:53 3.6KJalview annotation file for alignment
[ ]jp_KGyTsEs.jnet2015-04-17 18:53 5.1KJnet secondary structure output
[TXT]jp_KGyTsEs.profile2015-04-17 18:42 22KPSIBLAST profile from alignment
[ ]jp_KGyTsEs.pssm2015-04-17 18:53 30KPSIBLAST PSSM for Jnet
[TXT]jp_KGyTsEs.results.html2016-02-15 12:21 65KJPred results page
[TXT]jp_KGyTsEs.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_KGyTsEs.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_KGyTsEs.seq2015-04-17 17:02 152 Sequence data file
[TXT]jp_KGyTsEs.simple.html2015-04-17 18:53 1.4KBrief HTML: sequence and prediction only
[TXT]jp_KGyTsEs.svg.html2015-04-17 18:53 57KJalview SVG summary of results
[ ]jp_KGyTsEs.tar.gz2015-04-17 18:54 2.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.