JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:04 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3ge3e_.name2015-04-17 15:48 0 Job name flag file
[ ]jp_kWxFm5G.align2015-04-17 16:04 17KPSIBLAST alignment in FASTA format
[TXT]jp_kWxFm5G.als2015-04-17 16:04 2.5KAlscript command file for PS/PDF output
[ ]jp_kWxFm5G.blast.gz2015-04-17 16:04 45KCompressed PSIBLAST output file
[TXT]jp_kWxFm5G.coils.csv2015-04-17 16:04 642 COILS output in CSV format
[ ]jp_kWxFm5G.coilseq.lupas_142015-04-17 16:04 4.3KCOILS output, window length 14
[ ]jp_kWxFm5G.coilseq.lupas_212015-04-17 16:04 4.3KCOILS output, window length 21
[ ]jp_kWxFm5G.coilseq.lupas_282015-04-17 16:04 4.3KCOILS output, window length 28
[ ]jp_kWxFm5G.concise2015-04-17 16:04 36KPrediction: coiled-coil, solvent, alignment
[ ]jp_kWxFm5G.concise.blc2015-04-17 16:04 18KBLC format prediction and alignment data
[ ]jp_kWxFm5G.concise.fasta2015-04-17 16:04 18KPrediction: coiled-coil, solvent, alignment
[ ]jp_kWxFm5G.concise.pdf2015-04-17 16:04 116KPDF prediction and alignment data
[ ]jp_kWxFm5G.concise.ps2015-04-17 16:04 2.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_kWxFm5G.fasta2015-04-17 16:01 116 Input query sequence in FASTA format
[ ]jp_kWxFm5G.full_MSA.fasta2015-04-17 16:04 38KFull MSA before JPred filters in FASTA
[TXT]jp_kWxFm5G.full_MSA.fasta.noGaps.html2015-04-17 16:04 56KFull MSA before JPred filters in FASTA
[TXT]jp_kWxFm5G.full_MSA.fasta.withGaps.html2015-04-17 16:04 198KFull MSA before JPred filters in FASTA
[ ]jp_kWxFm5G.hmm2015-04-17 16:04 19KHHMer2 profile of the alignment
[TXT]jp_kWxFm5G.html2015-04-17 16:04 55KHTML prediction and alignment data
[ ]jp_kWxFm5G.input2015-04-17 15:48 109 Raw input data for analysis
[ ]jp_kWxFm5G.jalview2015-04-17 16:04 2.9KJalview annotation file for alignment
[ ]jp_kWxFm5G.jnet2015-04-17 16:04 3.8KJnet secondary structure output
[TXT]jp_kWxFm5G.profile2015-04-17 16:03 17KPSIBLAST profile from alignment
[ ]jp_kWxFm5G.pssm2015-04-17 16:04 22KPSIBLAST PSSM for Jnet
[TXT]jp_kWxFm5G.results.html2016-02-15 12:21 51KJPred results page
[TXT]jp_kWxFm5G.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_kWxFm5G.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_kWxFm5G.seq2015-04-17 15:48 116 Sequence data file
[TXT]jp_kWxFm5G.simple.html2015-04-17 16:04 1.3KBrief HTML: sequence and prediction only
[TXT]jp_kWxFm5G.svg.html2015-04-17 16:04 43KJalview SVG summary of results
[ ]jp_kWxFm5G.tar.gz2015-04-17 16:04 247KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.