JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:35 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3giua_.name2015-04-17 19:08 0 Job name flag file
[ ]jp_DDjZrsA.align2015-04-17 21:34 279KPSIBLAST alignment in FASTA format
[TXT]jp_DDjZrsA.als2015-04-17 21:34 3.2KAlscript command file for PS/PDF output
[ ]jp_DDjZrsA.blast.gz2015-04-17 21:32 2.1MCompressed PSIBLAST output file
[TXT]jp_DDjZrsA.coils.csv2015-04-17 21:34 1.3KCOILS output in CSV format
[ ]jp_DDjZrsA.coilseq.lupas_142015-04-17 21:34 8.9KCOILS output, window length 14
[ ]jp_DDjZrsA.coilseq.lupas_212015-04-17 21:34 8.9KCOILS output, window length 21
[ ]jp_DDjZrsA.coilseq.lupas_282015-04-17 21:34 8.9KCOILS output, window length 28
[ ]jp_DDjZrsA.concise2015-04-17 21:34 549KPrediction: coiled-coil, solvent, alignment
[ ]jp_DDjZrsA.concise.blc2015-04-17 21:34 279KBLC format prediction and alignment data
[ ]jp_DDjZrsA.concise.fasta2015-04-17 21:34 281KPrediction: coiled-coil, solvent, alignment
[ ]jp_DDjZrsA.concise.pdf2015-04-17 21:34 1.9MPDF prediction and alignment data
[ ]jp_DDjZrsA.concise.ps2015-04-17 21:34 34MPrediction: coiled-coil, solvent, alignment
[ ]jp_DDjZrsA.fasta2015-04-17 21:30 227 Input query sequence in FASTA format
[ ]jp_DDjZrsA.full_MSA.fasta2015-04-17 21:32 5.1MFull MSA before JPred filters in FASTA
[TXT]jp_DDjZrsA.full_MSA.fasta.noGaps.html2015-04-17 21:34 582KFull MSA before JPred filters in FASTA
[TXT]jp_DDjZrsA.full_MSA.fasta.withGaps.html2015-04-17 21:34 13MFull MSA before JPred filters in FASTA
[ ]jp_DDjZrsA.hmm2015-04-17 21:34 40KHHMer2 profile of the alignment
[TXT]jp_DDjZrsA.html2015-04-17 21:34 534KHTML prediction and alignment data
[ ]jp_DDjZrsA.input2015-04-17 19:08 219 Raw input data for analysis
[ ]jp_DDjZrsA.jalview2015-04-17 21:34 5.0KJalview annotation file for alignment
[ ]jp_DDjZrsA.jnet2015-04-17 21:34 7.8KJnet secondary structure output
[TXT]jp_DDjZrsA.profile2015-04-17 21:31 34KPSIBLAST profile from alignment
[ ]jp_DDjZrsA.pssm2015-04-17 21:34 46KPSIBLAST PSSM for Jnet
[TXT]jp_DDjZrsA.results.html2016-02-15 12:21 92KJPred results page
[TXT]jp_DDjZrsA.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_DDjZrsA.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_DDjZrsA.seq2015-04-17 19:08 227 Sequence data file
[TXT]jp_DDjZrsA.simple.html2015-04-17 21:34 1.6KBrief HTML: sequence and prediction only
[TXT]jp_DDjZrsA.svg.html2015-04-17 21:35 84KJalview SVG summary of results
[ ]jp_DDjZrsA.tar.gz2015-04-17 21:35 5.5MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.