JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:08 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3gmxa_.name2015-04-17 18:15 0 Job name flag file
[ ]jp_GlAXSXc.align2015-04-17 20:08 18KPSIBLAST alignment in FASTA format
[TXT]jp_GlAXSXc.als2015-04-17 20:08 2.7KAlscript command file for PS/PDF output
[ ]jp_GlAXSXc.blast.gz2015-04-17 20:08 36KCompressed PSIBLAST output file
[TXT]jp_GlAXSXc.coils.csv2015-04-17 20:08 948 COILS output in CSV format
[ ]jp_GlAXSXc.coilseq.lupas_142015-04-17 20:08 6.4KCOILS output, window length 14
[ ]jp_GlAXSXc.coilseq.lupas_212015-04-17 20:08 6.4KCOILS output, window length 21
[ ]jp_GlAXSXc.coilseq.lupas_282015-04-17 20:08 6.4KCOILS output, window length 28
[ ]jp_GlAXSXc.concise2015-04-17 20:08 40KPrediction: coiled-coil, solvent, alignment
[ ]jp_GlAXSXc.concise.blc2015-04-17 20:08 20KBLC format prediction and alignment data
[ ]jp_GlAXSXc.concise.fasta2015-04-17 20:08 19KPrediction: coiled-coil, solvent, alignment
[ ]jp_GlAXSXc.concise.pdf2015-04-17 20:08 117KPDF prediction and alignment data
[ ]jp_GlAXSXc.concise.ps2015-04-17 20:08 2.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_GlAXSXc.fasta2015-04-17 20:01 168 Input query sequence in FASTA format
[ ]jp_GlAXSXc.full_MSA.fasta2015-04-17 20:08 127KFull MSA before JPred filters in FASTA
[TXT]jp_GlAXSXc.full_MSA.fasta.noGaps.html2015-04-17 20:08 62KFull MSA before JPred filters in FASTA
[TXT]jp_GlAXSXc.full_MSA.fasta.withGaps.html2015-04-17 20:08 606KFull MSA before JPred filters in FASTA
[ ]jp_GlAXSXc.hmm2015-04-17 20:08 29KHHMer2 profile of the alignment
[TXT]jp_GlAXSXc.html2015-04-17 20:08 51KHTML prediction and alignment data
[ ]jp_GlAXSXc.input2015-04-17 18:15 160 Raw input data for analysis
[ ]jp_GlAXSXc.jalview2015-04-17 20:08 3.9KJalview annotation file for alignment
[ ]jp_GlAXSXc.jnet2015-04-17 20:08 5.6KJnet secondary structure output
[TXT]jp_GlAXSXc.profile2015-04-17 20:07 25KPSIBLAST profile from alignment
[ ]jp_GlAXSXc.pssm2015-04-17 20:08 33KPSIBLAST PSSM for Jnet
[TXT]jp_GlAXSXc.results.html2016-02-15 12:21 71KJPred results page
[TXT]jp_GlAXSXc.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_GlAXSXc.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_GlAXSXc.seq2015-04-17 18:15 168 Sequence data file
[TXT]jp_GlAXSXc.simple.html2015-04-17 20:08 1.4KBrief HTML: sequence and prediction only
[TXT]jp_GlAXSXc.svg.html2015-04-17 20:08 63KJalview SVG summary of results
[ ]jp_GlAXSXc.tar.gz2015-04-17 20:08 278KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.