JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:56 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3gp6a_.name2015-04-17 18:52 0 Job name flag file
[ ]jp_954gExy.align2015-04-17 21:56 15KPSIBLAST alignment in FASTA format
[TXT]jp_954gExy.als2015-04-17 21:56 3.2KAlscript command file for PS/PDF output
[ ]jp_954gExy.blast.gz2015-04-17 21:56 63KCompressed PSIBLAST output file
[TXT]jp_954gExy.coils.csv2015-04-17 21:56 960 COILS output in CSV format
[ ]jp_954gExy.coilseq.lupas_142015-04-17 21:56 6.5KCOILS output, window length 14
[ ]jp_954gExy.coilseq.lupas_212015-04-17 21:56 6.5KCOILS output, window length 21
[ ]jp_954gExy.coilseq.lupas_282015-04-17 21:56 6.5KCOILS output, window length 28
[ ]jp_954gExy.concise2015-04-17 21:56 36KPrediction: coiled-coil, solvent, alignment
[ ]jp_954gExy.concise.blc2015-04-17 21:56 17KBLC format prediction and alignment data
[ ]jp_954gExy.concise.fasta2015-04-17 21:56 17KPrediction: coiled-coil, solvent, alignment
[ ]jp_954gExy.concise.pdf2015-04-17 21:56 110KPDF prediction and alignment data
[ ]jp_954gExy.concise.ps2015-04-17 21:56 2.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_954gExy.fasta2015-04-17 20:58 170 Input query sequence in FASTA format
[ ]jp_954gExy.full_MSA.fasta2015-04-17 21:56 70KFull MSA before JPred filters in FASTA
[TXT]jp_954gExy.full_MSA.fasta.noGaps.html2015-04-17 21:56 60KFull MSA before JPred filters in FASTA
[TXT]jp_954gExy.full_MSA.fasta.withGaps.html2015-04-17 21:56 228KFull MSA before JPred filters in FASTA
[ ]jp_954gExy.hmm2015-04-17 21:56 29KHHMer2 profile of the alignment
[TXT]jp_954gExy.html2015-04-17 21:56 48KHTML prediction and alignment data
[ ]jp_954gExy.input2015-04-17 18:52 162 Raw input data for analysis
[ ]jp_954gExy.jalview2015-04-17 21:56 3.9KJalview annotation file for alignment
[ ]jp_954gExy.jnet2015-04-17 21:56 5.7KJnet secondary structure output
[TXT]jp_954gExy.profile2015-04-17 21:43 25KPSIBLAST profile from alignment
[ ]jp_954gExy.pssm2015-04-17 21:56 33KPSIBLAST PSSM for Jnet
[TXT]jp_954gExy.results.html2016-02-15 12:21 72KJPred results page
[TXT]jp_954gExy.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_954gExy.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_954gExy.seq2015-04-17 18:52 170 Sequence data file
[TXT]jp_954gExy.simple.html2015-04-17 21:56 1.5KBrief HTML: sequence and prediction only
[TXT]jp_954gExy.svg.html2015-04-17 21:56 64KJalview SVG summary of results
[ ]jp_954gExy.tar.gz2015-04-17 21:56 258KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.