JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:15 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3h1da_.name2015-04-17 19:28 0 Job name flag file
[ ]jp_MTj5VqT.align2015-04-17 22:13 243KPSIBLAST alignment in FASTA format
[TXT]jp_MTj5VqT.als2015-04-17 22:13 4.6KAlscript command file for PS/PDF output
[ ]jp_MTj5VqT.blast.gz2015-04-17 22:10 22MCompressed PSIBLAST output file
[TXT]jp_MTj5VqT.coils.csv2015-04-17 22:13 2.3KCOILS output in CSV format
[ ]jp_MTj5VqT.coilseq.lupas_142015-04-17 22:13 16KCOILS output, window length 14
[ ]jp_MTj5VqT.coilseq.lupas_212015-04-17 22:13 16KCOILS output, window length 21
[ ]jp_MTj5VqT.coilseq.lupas_282015-04-17 22:13 16KCOILS output, window length 28
[ ]jp_MTj5VqT.concise2015-04-17 22:13 490KPrediction: coiled-coil, solvent, alignment
[ ]jp_MTj5VqT.concise.blc2015-04-17 22:13 245KBLC format prediction and alignment data
[ ]jp_MTj5VqT.concise.fasta2015-04-17 22:13 247KPrediction: coiled-coil, solvent, alignment
[ ]jp_MTj5VqT.concise.pdf2015-04-17 22:14 1.8MPDF prediction and alignment data
[ ]jp_MTj5VqT.concise.ps2015-04-17 22:13 31MPrediction: coiled-coil, solvent, alignment
[ ]jp_MTj5VqT.fasta2015-04-17 22:03 400 Input query sequence in FASTA format
[ ]jp_MTj5VqT.full_MSA.fasta2015-04-17 22:12 38MFull MSA before JPred filters in FASTA
[TXT]jp_MTj5VqT.full_MSA.fasta.noGaps.html2015-04-17 22:15 2.7MFull MSA before JPred filters in FASTA
[TXT]jp_MTj5VqT.full_MSA.fasta.withGaps.html2015-04-17 22:15 84MFull MSA before JPred filters in FASTA
[ ]jp_MTj5VqT.hmm2015-04-17 22:13 72KHHMer2 profile of the alignment
[TXT]jp_MTj5VqT.html2015-04-17 22:13 394KHTML prediction and alignment data
[ ]jp_MTj5VqT.input2015-04-17 19:28 389 Raw input data for analysis
[ ]jp_MTj5VqT.jalview2015-04-17 22:13 8.5KJalview annotation file for alignment
[ ]jp_MTj5VqT.jnet2015-04-17 22:13 14KJnet secondary structure output
[TXT]jp_MTj5VqT.profile2015-04-17 22:09 61KPSIBLAST profile from alignment
[ ]jp_MTj5VqT.pssm2015-04-17 22:13 82KPSIBLAST PSSM for Jnet
[TXT]jp_MTj5VqT.results.html2016-02-15 12:21 160KJPred results page
[TXT]jp_MTj5VqT.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_MTj5VqT.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_MTj5VqT.seq2015-04-17 19:28 400 Sequence data file
[TXT]jp_MTj5VqT.simple.html2015-04-17 22:13 2.1KBrief HTML: sequence and prediction only
[TXT]jp_MTj5VqT.svg.html2015-04-17 22:15 152KJalview SVG summary of results
[ ]jp_MTj5VqT.tar.gz2015-04-17 22:15 32MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.