JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:12 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3h63a_.name2015-04-17 19:28 0 Job name flag file
[ ]jp_fCyogmd.align2015-04-17 22:11 213KPSIBLAST alignment in FASTA format
[TXT]jp_fCyogmd.als2015-04-17 22:11 4.1KAlscript command file for PS/PDF output
[ ]jp_fCyogmd.blast.gz2015-04-17 22:09 13MCompressed PSIBLAST output file
[TXT]jp_fCyogmd.coils.csv2015-04-17 22:11 1.9KCOILS output in CSV format
[ ]jp_fCyogmd.coilseq.lupas_142015-04-17 22:11 13KCOILS output, window length 14
[ ]jp_fCyogmd.coilseq.lupas_212015-04-17 22:11 13KCOILS output, window length 21
[ ]jp_fCyogmd.coilseq.lupas_282015-04-17 22:11 13KCOILS output, window length 28
[ ]jp_fCyogmd.concise2015-04-17 22:11 428KPrediction: coiled-coil, solvent, alignment
[ ]jp_fCyogmd.concise.blc2015-04-17 22:11 215KBLC format prediction and alignment data
[ ]jp_fCyogmd.concise.fasta2015-04-17 22:11 216KPrediction: coiled-coil, solvent, alignment
[ ]jp_fCyogmd.concise.pdf2015-04-17 22:12 1.5MPDF prediction and alignment data
[ ]jp_fCyogmd.concise.ps2015-04-17 22:11 27MPrediction: coiled-coil, solvent, alignment
[ ]jp_fCyogmd.fasta2015-04-17 22:03 332 Input query sequence in FASTA format
[ ]jp_fCyogmd.full_MSA.fasta2015-04-17 22:10 26MFull MSA before JPred filters in FASTA
[TXT]jp_fCyogmd.full_MSA.fasta.noGaps.html2015-04-17 22:12 2.1MFull MSA before JPred filters in FASTA
[TXT]jp_fCyogmd.full_MSA.fasta.withGaps.html2015-04-17 22:12 59MFull MSA before JPred filters in FASTA
[ ]jp_fCyogmd.hmm2015-04-17 22:11 59KHHMer2 profile of the alignment
[TXT]jp_fCyogmd.html2015-04-17 22:11 363KHTML prediction and alignment data
[ ]jp_fCyogmd.input2015-04-17 19:28 322 Raw input data for analysis
[ ]jp_fCyogmd.jalview2015-04-17 22:11 7.0KJalview annotation file for alignment
[ ]jp_fCyogmd.jnet2015-04-17 22:11 11KJnet secondary structure output
[TXT]jp_fCyogmd.profile2015-04-17 22:08 50KPSIBLAST profile from alignment
[ ]jp_fCyogmd.pssm2015-04-17 22:11 68KPSIBLAST PSSM for Jnet
[TXT]jp_fCyogmd.results.html2016-02-15 12:21 133KJPred results page
[TXT]jp_fCyogmd.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_fCyogmd.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_fCyogmd.seq2015-04-17 19:28 332 Sequence data file
[TXT]jp_fCyogmd.simple.html2015-04-17 22:11 2.0KBrief HTML: sequence and prediction only
[TXT]jp_fCyogmd.svg.html2015-04-17 22:12 125KJalview SVG summary of results
[ ]jp_fCyogmd.tar.gz2015-04-17 22:12 20MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.