JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:02 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3hwua_.name2015-04-17 16:26 0 Job name flag file
[ ]jp_RvgJ1fb.align2015-04-17 17:01 133KPSIBLAST alignment in FASTA format
[TXT]jp_RvgJ1fb.als2015-04-17 17:01 2.9KAlscript command file for PS/PDF output
[ ]jp_RvgJ1fb.blast.gz2015-04-17 17:01 428KCompressed PSIBLAST output file
[TXT]jp_RvgJ1fb.coils.csv2015-04-17 17:01 894 COILS output in CSV format
[ ]jp_RvgJ1fb.coilseq.lupas_142015-04-17 17:01 6.0KCOILS output, window length 14
[ ]jp_RvgJ1fb.coilseq.lupas_212015-04-17 17:01 6.0KCOILS output, window length 21
[ ]jp_RvgJ1fb.coilseq.lupas_282015-04-17 17:01 6.0KCOILS output, window length 28
[ ]jp_RvgJ1fb.concise2015-04-17 17:01 261KPrediction: coiled-coil, solvent, alignment
[ ]jp_RvgJ1fb.concise.blc2015-04-17 17:01 133KBLC format prediction and alignment data
[ ]jp_RvgJ1fb.concise.fasta2015-04-17 17:01 135KPrediction: coiled-coil, solvent, alignment
[ ]jp_RvgJ1fb.concise.pdf2015-04-17 17:02 916KPDF prediction and alignment data
[ ]jp_RvgJ1fb.concise.ps2015-04-17 17:01 16MPrediction: coiled-coil, solvent, alignment
[ ]jp_RvgJ1fb.fasta2015-04-17 16:58 159 Input query sequence in FASTA format
[ ]jp_RvgJ1fb.full_MSA.fasta2015-04-17 17:01 830KFull MSA before JPred filters in FASTA
[TXT]jp_RvgJ1fb.full_MSA.fasta.noGaps.html2015-04-17 17:02 287KFull MSA before JPred filters in FASTA
[TXT]jp_RvgJ1fb.full_MSA.fasta.withGaps.html2015-04-17 17:02 3.7MFull MSA before JPred filters in FASTA
[ ]jp_RvgJ1fb.hmm2015-04-17 17:01 27KHHMer2 profile of the alignment
[TXT]jp_RvgJ1fb.html2015-04-17 17:01 308KHTML prediction and alignment data
[ ]jp_RvgJ1fb.input2015-04-17 16:26 151 Raw input data for analysis
[ ]jp_RvgJ1fb.jalview2015-04-17 17:01 3.7KJalview annotation file for alignment
[ ]jp_RvgJ1fb.jnet2015-04-17 17:01 5.3KJnet secondary structure output
[TXT]jp_RvgJ1fb.profile2015-04-17 17:00 23KPSIBLAST profile from alignment
[ ]jp_RvgJ1fb.pssm2015-04-17 17:01 31KPSIBLAST PSSM for Jnet
[TXT]jp_RvgJ1fb.results.html2016-02-15 12:21 67KJPred results page
[TXT]jp_RvgJ1fb.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_RvgJ1fb.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_RvgJ1fb.seq2015-04-17 16:26 159 Sequence data file
[TXT]jp_RvgJ1fb.simple.html2015-04-17 17:01 1.4KBrief HTML: sequence and prediction only
[TXT]jp_RvgJ1fb.svg.html2015-04-17 17:02 58KJalview SVG summary of results
[ ]jp_RvgJ1fb.tar.gz2015-04-17 17:02 1.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.