JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:05 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3ip0a_.name2015-04-17 16:26 0 Job name flag file
[ ]jp_K4Iu0q6.align2015-04-17 17:05 163KPSIBLAST alignment in FASTA format
[TXT]jp_K4Iu0q6.als2015-04-17 17:05 2.9KAlscript command file for PS/PDF output
[ ]jp_K4Iu0q6.blast.gz2015-04-17 17:04 3.7MCompressed PSIBLAST output file
[TXT]jp_K4Iu0q6.coils.csv2015-04-17 17:05 1.0KCOILS output in CSV format
[ ]jp_K4Iu0q6.coilseq.lupas_142015-04-17 17:05 6.6KCOILS output, window length 14
[ ]jp_K4Iu0q6.coilseq.lupas_212015-04-17 17:05 6.6KCOILS output, window length 21
[ ]jp_K4Iu0q6.coilseq.lupas_282015-04-17 17:05 6.6KCOILS output, window length 28
[ ]jp_K4Iu0q6.concise2015-04-17 17:05 318KPrediction: coiled-coil, solvent, alignment
[ ]jp_K4Iu0q6.concise.blc2015-04-17 17:05 163KBLC format prediction and alignment data
[ ]jp_K4Iu0q6.concise.fasta2015-04-17 17:05 165KPrediction: coiled-coil, solvent, alignment
[ ]jp_K4Iu0q6.concise.pdf2015-04-17 17:05 1.1MPDF prediction and alignment data
[ ]jp_K4Iu0q6.concise.ps2015-04-17 17:05 20MPrediction: coiled-coil, solvent, alignment
[ ]jp_K4Iu0q6.fasta2015-04-17 16:58 173 Input query sequence in FASTA format
[ ]jp_K4Iu0q6.full_MSA.fasta2015-04-17 17:04 6.3MFull MSA before JPred filters in FASTA
[TXT]jp_K4Iu0q6.full_MSA.fasta.noGaps.html2015-04-17 17:05 1.2MFull MSA before JPred filters in FASTA
[TXT]jp_K4Iu0q6.full_MSA.fasta.withGaps.html2015-04-17 17:05 20MFull MSA before JPred filters in FASTA
[ ]jp_K4Iu0q6.hmm2015-04-17 17:05 30KHHMer2 profile of the alignment
[TXT]jp_K4Iu0q6.html2015-04-17 17:05 355KHTML prediction and alignment data
[ ]jp_K4Iu0q6.input2015-04-17 16:26 165 Raw input data for analysis
[ ]jp_K4Iu0q6.jalview2015-04-17 17:05 4.0KJalview annotation file for alignment
[ ]jp_K4Iu0q6.jnet2015-04-17 17:05 5.8KJnet secondary structure output
[TXT]jp_K4Iu0q6.profile2015-04-17 17:02 26KPSIBLAST profile from alignment
[ ]jp_K4Iu0q6.pssm2015-04-17 17:05 34KPSIBLAST PSSM for Jnet
[TXT]jp_K4Iu0q6.results.html2016-02-15 12:21 73KJPred results page
[TXT]jp_K4Iu0q6.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_K4Iu0q6.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_K4Iu0q6.seq2015-04-17 16:26 173 Sequence data file
[TXT]jp_K4Iu0q6.simple.html2015-04-17 17:05 1.5KBrief HTML: sequence and prediction only
[TXT]jp_K4Iu0q6.svg.html2015-04-17 17:05 65KJalview SVG summary of results
[ ]jp_K4Iu0q6.tar.gz2015-04-17 17:05 7.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.