A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 22:13 | 4.7K | JPred server log file |
| README | 2016-02-15 12:21 | 2.1K | Results file descriptions |
| d3ip4c_.name | 2015-04-17 19:29 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_m0wMC4w.align | 2015-04-17 22:12 | 106K | PSIBLAST alignment in FASTA format |
| jp_m0wMC4w.als | 2015-04-17 22:12 | 1.8K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_m0wMC4w.blast.gz | 2015-04-17 22:11 | 858K | Compressed PSIBLAST output file |
| jp_m0wMC4w.coils.csv | 2015-04-17 22:12 | 582 | COILS output in CSV format |
| jp_m0wMC4w.coilseq.lupas_14 | 2015-04-17 22:12 | 3.9K | COILS output, window length 14 |
| jp_m0wMC4w.coilseq.lupas_21 | 2015-04-17 22:12 | 3.9K | COILS output, window length 21 |
| jp_m0wMC4w.coilseq.lupas_28 | 2015-04-17 22:12 | 3.9K | COILS output, window length 28 |
| jp_m0wMC4w.concise | 2015-04-17 22:12 | 204K | Prediction: coiled-coil, solvent, alignment |
| jp_m0wMC4w.concise.blc | 2015-04-17 22:12 | 106K | BLC format prediction and alignment data |
| jp_m0wMC4w.concise.fasta | 2015-04-17 22:12 | 107K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_m0wMC4w.concise.pdf | 2015-04-17 22:12 | 732K | PDF prediction and alignment data |
| jp_m0wMC4w.concise.ps | 2015-04-17 22:12 | 12M | Prediction: coiled-coil, solvent, alignment |
| jp_m0wMC4w.fasta | 2015-04-17 22:06 | 106 | Input query sequence in FASTA format |
| jp_m0wMC4w.full_MSA.fasta | 2015-04-17 22:12 | 1.2M | Full MSA before JPred filters in FASTA |
| jp_m0wMC4w.full_MSA.fasta.noGaps.html | 2015-04-17 22:12 | 620K | Full MSA before JPred filters in FASTA |
| jp_m0wMC4w.full_MSA.fasta.withGaps.html | 2015-04-17 22:12 | 4.8M | Full MSA before JPred filters in FASTA |
| jp_m0wMC4w.hmm | 2015-04-17 22:12 | 17K | HHMer2 profile of the alignment |
| jp_m0wMC4w.html | 2015-04-17 22:12 | 301K | HTML prediction and alignment data |
| jp_m0wMC4w.input | 2015-04-17 19:29 | 99 | Raw input data for analysis |
| jp_m0wMC4w.jalview | 2015-04-17 22:12 | 2.7K | Jalview annotation file for alignment |
| jp_m0wMC4w.jnet | 2015-04-17 22:12 | 3.4K | Jnet secondary structure output |
| jp_m0wMC4w.profile | 2015-04-17 22:10 | 15K | PSIBLAST profile from alignment |
| jp_m0wMC4w.pssm | 2015-04-17 22:12 | 20K | PSIBLAST PSSM for Jnet |
| jp_m0wMC4w.results.html | 2016-02-15 12:21 | 46K | JPred results page |
| jp_m0wMC4w.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_m0wMC4w.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_m0wMC4w.seq | 2015-04-17 19:29 | 106 | Sequence data file |
| jp_m0wMC4w.simple.html | 2015-04-17 22:12 | 1.1K | Brief HTML: sequence and prediction only |
![[TXT]](jp_m0wMC4w.svg.html) | jp_m0wMC4w.svg.html | 2015-04-17 22:13 | 38K | Jalview SVG summary of results |
| jp_m0wMC4w.tar.gz | 2015-04-17 22:13 | 2.3M | Archive containing complete results |
