A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 16:06 | 4.7K | JPred server log file |
| README | 2016-02-15 12:21 | 2.1K | Results file descriptions |
| d3ku3a_.name | 2015-04-17 15:49 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_ZqnvZCo.align | 2015-04-17 16:06 | 41K | PSIBLAST alignment in FASTA format |
| jp_ZqnvZCo.als | 2015-04-17 16:06 | 5.3K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_ZqnvZCo.blast.gz | 2015-04-17 16:06 | 189K | Compressed PSIBLAST output file |
| jp_ZqnvZCo.coils.csv | 2015-04-17 16:06 | 1.9K | COILS output in CSV format |
| jp_ZqnvZCo.coilseq.lupas_14 | 2015-04-17 16:06 | 14K | COILS output, window length 14 |
| jp_ZqnvZCo.coilseq.lupas_21 | 2015-04-17 16:06 | 14K | COILS output, window length 21 |
| jp_ZqnvZCo.coilseq.lupas_28 | 2015-04-17 16:06 | 14K | COILS output, window length 28 |
| jp_ZqnvZCo.concise | 2015-04-17 16:06 | 94K | Prediction: coiled-coil, solvent, alignment |
| jp_ZqnvZCo.concise.blc | 2015-04-17 16:06 | 45K | BLC format prediction and alignment data |
| jp_ZqnvZCo.concise.fasta | 2015-04-17 16:06 | 45K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_ZqnvZCo.concise.pdf | 2015-04-17 16:06 | 275K | PDF prediction and alignment data |
| jp_ZqnvZCo.concise.ps | 2015-04-17 16:06 | 5.4M | Prediction: coiled-coil, solvent, alignment |
| jp_ZqnvZCo.fasta | 2015-04-17 16:02 | 341 | Input query sequence in FASTA format |
| jp_ZqnvZCo.full_MSA.fasta | 2015-04-17 16:06 | 243K | Full MSA before JPred filters in FASTA |
| jp_ZqnvZCo.full_MSA.fasta.noGaps.html | 2015-04-17 16:06 | 241K | Full MSA before JPred filters in FASTA |
| jp_ZqnvZCo.full_MSA.fasta.withGaps.html | 2015-04-17 16:06 | 799K | Full MSA before JPred filters in FASTA |
| jp_ZqnvZCo.hmm | 2015-04-17 16:06 | 61K | HHMer2 profile of the alignment |
| jp_ZqnvZCo.html | 2015-04-17 16:06 | 88K | HTML prediction and alignment data |
| jp_ZqnvZCo.input | 2015-04-17 15:49 | 331 | Raw input data for analysis |
| jp_ZqnvZCo.jalview | 2015-04-17 16:06 | 7.2K | Jalview annotation file for alignment |
| jp_ZqnvZCo.jnet | 2015-04-17 16:06 | 12K | Jnet secondary structure output |
| jp_ZqnvZCo.profile | 2015-04-17 16:04 | 52K | PSIBLAST profile from alignment |
| jp_ZqnvZCo.pssm | 2015-04-17 16:06 | 70K | PSIBLAST PSSM for Jnet |
| jp_ZqnvZCo.results.html | 2016-02-15 12:21 | 139K | JPred results page |
| jp_ZqnvZCo.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_ZqnvZCo.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_ZqnvZCo.seq | 2015-04-17 15:49 | 341 | Sequence data file |
| jp_ZqnvZCo.simple.html | 2015-04-17 16:06 | 2.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_ZqnvZCo.svg.html) | jp_ZqnvZCo.svg.html | 2015-04-17 16:06 | 131K | Jalview SVG summary of results |
| jp_ZqnvZCo.tar.gz | 2015-04-17 16:06 | 643K | Archive containing complete results |
