A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[ ]](/icons/unknown.gif){kind=icon} | jp__6ZFOpV.input | 2015-04-17 18:16 | 118 | Raw input data for analysis |
| jp__6ZFOpV.seq | 2015-04-17 18:16 | 125 | Sequence data file |
![[TXT]](/icons/text.gif){kind=icon} | d3ldqb_.name | 2015-04-17 18:16 | 0 | Job name flag file |
| jp__6ZFOpV.fasta | 2015-04-17 20:03 | 125 | Input query sequence in FASTA format |
| jp__6ZFOpV.profile | 2015-04-17 20:07 | 18K | PSIBLAST profile from alignment |
![[ ]](/icons/compressed.gif){kind=icon} | jp__6ZFOpV.blast.gz | 2015-04-17 20:08 | 28K | Compressed PSIBLAST output file |
| jp__6ZFOpV.full_MSA.fasta | 2015-04-17 20:08 | 32K | Full MSA before JPred filters in FASTA |
| jp__6ZFOpV.align | 2015-04-17 20:08 | 6.6K | PSIBLAST alignment in FASTA format |
| jp__6ZFOpV.pssm | 2015-04-17 20:08 | 24K | PSIBLAST PSSM for Jnet |
| jp__6ZFOpV.hmm | 2015-04-17 20:08 | 21K | HHMer2 profile of the alignment |
| jp__6ZFOpV.jnet | 2015-04-17 20:08 | 4.1K | Jnet secondary structure output |
| jp__6ZFOpV.coilseq.lupas_21 | 2015-04-17 20:08 | 4.7K | COILS output, window length 21 |
| jp__6ZFOpV.coilseq.lupas_14 | 2015-04-17 20:08 | 4.7K | COILS output, window length 14 |
| jp__6ZFOpV.coilseq.lupas_28 | 2015-04-17 20:08 | 4.7K | COILS output, window length 28 |
| jp__6ZFOpV.coils.csv | 2015-04-17 20:08 | 696 | COILS output in CSV format |
| jp__6ZFOpV.concise | 2015-04-17 20:08 | 17K | Prediction: coiled-coil, solvent, alignment |
| jp__6ZFOpV.html | 2015-04-17 20:08 | 31K | HTML prediction and alignment data |
| jp__6ZFOpV.simple.html | 2015-04-17 20:08 | 1.1K | Brief HTML: sequence and prediction only |
| jp__6ZFOpV.jalview | 2015-04-17 20:08 | 3.1K | Jalview annotation file for alignment |
| jp__6ZFOpV.concise.fasta | 2015-04-17 20:08 | 7.8K | Prediction: coiled-coil, solvent, alignment |
| jp__6ZFOpV.concise.blc | 2015-04-17 20:08 | 8.2K | BLC format prediction and alignment data |
| jp__6ZFOpV.als | 2015-04-17 20:08 | 1.7K | Alscript command file for PS/PDF output |
| jp__6ZFOpV.concise.ps | 2015-04-17 20:08 | 951K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp__6ZFOpV.concise.pdf | 2015-04-17 20:09 | 52K | PDF prediction and alignment data |
| jp__6ZFOpV.full_MSA.fasta.withGaps.html | 2015-04-17 20:09 | 91K | Full MSA before JPred filters in FASTA |
| jp__6ZFOpV.full_MSA.fasta.noGaps.html | 2015-04-17 20:09 | 32K | Full MSA before JPred filters in FASTA |
![[TXT]](jp__6ZFOpV.svg.html) | jp__6ZFOpV.svg.html | 2015-04-17 20:09 | 44K | Jalview SVG summary of results |
| LOG | 2015-04-17 20:09 | 4.7K | JPred server log file |
| jp__6ZFOpV.tar.gz | 2015-04-17 20:09 | 133K | Archive containing complete results |
| README | 2016-02-15 12:21 | 2.1K | Results file descriptions |
| jp__6ZFOpV.results.html | 2016-02-15 12:21 | 52K | JPred results page |
| jp__6ZFOpV.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp__6ZFOpV.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
