JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:09 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3lmna_.name2015-04-17 17:41 0 Job name flag file
[ ]jp_msMMl7M.align2015-04-17 19:08 106KPSIBLAST alignment in FASTA format
[TXT]jp_msMMl7M.als2015-04-17 19:08 2.4KAlscript command file for PS/PDF output
[ ]jp_msMMl7M.blast.gz2015-04-17 19:08 843KCompressed PSIBLAST output file
[TXT]jp_msMMl7M.coils.csv2015-04-17 19:08 822 COILS output in CSV format
[ ]jp_msMMl7M.coilseq.lupas_142015-04-17 19:08 5.5KCOILS output, window length 14
[ ]jp_msMMl7M.coilseq.lupas_212015-04-17 19:08 5.5KCOILS output, window length 21
[ ]jp_msMMl7M.coilseq.lupas_282015-04-17 19:08 5.5KCOILS output, window length 28
[ ]jp_msMMl7M.concise2015-04-17 19:08 209KPrediction: coiled-coil, solvent, alignment
[ ]jp_msMMl7M.concise.blc2015-04-17 19:08 107KBLC format prediction and alignment data
[ ]jp_msMMl7M.concise.fasta2015-04-17 19:08 108KPrediction: coiled-coil, solvent, alignment
[ ]jp_msMMl7M.concise.pdf2015-04-17 19:09 675KPDF prediction and alignment data
[ ]jp_msMMl7M.concise.ps2015-04-17 19:08 12MPrediction: coiled-coil, solvent, alignment
[ ]jp_msMMl7M.fasta2015-04-17 19:03 146 Input query sequence in FASTA format
[ ]jp_msMMl7M.full_MSA.fasta2015-04-17 19:08 2.0MFull MSA before JPred filters in FASTA
[TXT]jp_msMMl7M.full_MSA.fasta.noGaps.html2015-04-17 19:09 325KFull MSA before JPred filters in FASTA
[TXT]jp_msMMl7M.full_MSA.fasta.withGaps.html2015-04-17 19:09 5.4MFull MSA before JPred filters in FASTA
[ ]jp_msMMl7M.hmm2015-04-17 19:08 25KHHMer2 profile of the alignment
[TXT]jp_msMMl7M.html2015-04-17 19:08 256KHTML prediction and alignment data
[ ]jp_msMMl7M.input2015-04-17 17:41 139 Raw input data for analysis
[ ]jp_msMMl7M.jalview2015-04-17 19:08 3.4KJalview annotation file for alignment
[ ]jp_msMMl7M.jnet2015-04-17 19:08 4.9KJnet secondary structure output
[TXT]jp_msMMl7M.profile2015-04-17 19:07 21KPSIBLAST profile from alignment
[ ]jp_msMMl7M.pssm2015-04-17 19:08 28KPSIBLAST PSSM for Jnet
[TXT]jp_msMMl7M.results.html2016-02-15 12:21 61KJPred results page
[TXT]jp_msMMl7M.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_msMMl7M.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_msMMl7M.seq2015-04-17 17:41 146 Sequence data file
[TXT]jp_msMMl7M.simple.html2015-04-17 19:08 1.3KBrief HTML: sequence and prediction only
[TXT]jp_msMMl7M.svg.html2015-04-17 19:09 53KJalview SVG summary of results
[ ]jp_msMMl7M.tar.gz2015-04-17 19:09 2.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.