JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:14 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3m4ia_.name2015-04-17 19:30 0 Job name flag file
[ ]jp_50yBKY9.align2015-04-17 22:13 99KPSIBLAST alignment in FASTA format
[TXT]jp_50yBKY9.als2015-04-17 22:14 3.3KAlscript command file for PS/PDF output
[ ]jp_50yBKY9.blast.gz2015-04-17 22:13 7.5MCompressed PSIBLAST output file
[TXT]jp_50yBKY9.coils.csv2015-04-17 22:13 1.1KCOILS output in CSV format
[ ]jp_50yBKY9.coilseq.lupas_142015-04-17 22:13 8.0KCOILS output, window length 14
[ ]jp_50yBKY9.coilseq.lupas_212015-04-17 22:13 8.0KCOILS output, window length 21
[ ]jp_50yBKY9.coilseq.lupas_282015-04-17 22:13 8.0KCOILS output, window length 28
[ ]jp_50yBKY9.concise2015-04-17 22:13 200KPrediction: coiled-coil, solvent, alignment
[ ]jp_50yBKY9.concise.blc2015-04-17 22:14 101KBLC format prediction and alignment data
[ ]jp_50yBKY9.concise.fasta2015-04-17 22:14 101KPrediction: coiled-coil, solvent, alignment
[ ]jp_50yBKY9.concise.pdf2015-04-17 22:14 640KPDF prediction and alignment data
[ ]jp_50yBKY9.concise.ps2015-04-17 22:14 12MPrediction: coiled-coil, solvent, alignment
[ ]jp_50yBKY9.fasta2015-04-17 22:07 205 Input query sequence in FASTA format
[ ]jp_50yBKY9.full_MSA.fasta2015-04-17 22:13 15MFull MSA before JPred filters in FASTA
[TXT]jp_50yBKY9.full_MSA.fasta.noGaps.html2015-04-17 22:14 2.3MFull MSA before JPred filters in FASTA
[TXT]jp_50yBKY9.full_MSA.fasta.withGaps.html2015-04-17 22:14 42MFull MSA before JPred filters in FASTA
[ ]jp_50yBKY9.hmm2015-04-17 22:13 36KHHMer2 profile of the alignment
[TXT]jp_50yBKY9.html2015-04-17 22:14 210KHTML prediction and alignment data
[ ]jp_50yBKY9.input2015-04-17 19:30 197 Raw input data for analysis
[ ]jp_50yBKY9.jalview2015-04-17 22:14 4.7KJalview annotation file for alignment
[ ]jp_50yBKY9.jnet2015-04-17 22:13 7.0KJnet secondary structure output
[TXT]jp_50yBKY9.profile2015-04-17 22:11 31KPSIBLAST profile from alignment
[ ]jp_50yBKY9.pssm2015-04-17 22:13 41KPSIBLAST PSSM for Jnet
[TXT]jp_50yBKY9.results.html2016-02-15 12:21 86KJPred results page
[TXT]jp_50yBKY9.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_50yBKY9.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_50yBKY9.seq2015-04-17 19:30 205 Sequence data file
[TXT]jp_50yBKY9.simple.html2015-04-17 22:14 1.6KBrief HTML: sequence and prediction only
[TXT]jp_50yBKY9.svg.html2015-04-17 22:14 78KJalview SVG summary of results
[ ]jp_50yBKY9.tar.gz2015-04-17 22:14 12MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.