JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:22 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3m5qa_.name2015-04-17 18:16 0 Job name flag file
[ ]jp_9uU9aDD.align2015-04-17 20:19 281KPSIBLAST alignment in FASTA format
[TXT]jp_9uU9aDD.als2015-04-17 20:19 4.1KAlscript command file for PS/PDF output
[ ]jp_9uU9aDD.blast.gz2015-04-17 20:16 16MCompressed PSIBLAST output file
[TXT]jp_9uU9aDD.coils.csv2015-04-17 20:19 2.1KCOILS output in CSV format
[ ]jp_9uU9aDD.coilseq.lupas_142015-04-17 20:19 15KCOILS output, window length 14
[ ]jp_9uU9aDD.coilseq.lupas_212015-04-17 20:19 15KCOILS output, window length 21
[ ]jp_9uU9aDD.coilseq.lupas_282015-04-17 20:19 15KCOILS output, window length 28
[ ]jp_9uU9aDD.concise2015-04-17 20:19 563KPrediction: coiled-coil, solvent, alignment
[ ]jp_9uU9aDD.concise.blc2015-04-17 20:19 283KBLC format prediction and alignment data
[ ]jp_9uU9aDD.concise.fasta2015-04-17 20:19 285KPrediction: coiled-coil, solvent, alignment
[ ]jp_9uU9aDD.concise.pdf2015-04-17 20:20 1.7MPDF prediction and alignment data
[ ]jp_9uU9aDD.concise.ps2015-04-17 20:19 34MPrediction: coiled-coil, solvent, alignment
[ ]jp_9uU9aDD.fasta2015-04-17 20:04 374 Input query sequence in FASTA format
[ ]jp_9uU9aDD.full_MSA.fasta2015-04-17 20:18 43MFull MSA before JPred filters in FASTA
[TXT]jp_9uU9aDD.full_MSA.fasta.noGaps.html2015-04-17 20:21 3.5MFull MSA before JPred filters in FASTA
[TXT]jp_9uU9aDD.full_MSA.fasta.withGaps.html2015-04-17 20:21 104MFull MSA before JPred filters in FASTA
[ ]jp_9uU9aDD.hmm2015-04-17 20:19 67KHHMer2 profile of the alignment
[TXT]jp_9uU9aDD.html2015-04-17 20:19 452KHTML prediction and alignment data
[ ]jp_9uU9aDD.input2015-04-17 18:16 364 Raw input data for analysis
[ ]jp_9uU9aDD.jalview2015-04-17 20:19 7.8KJalview annotation file for alignment
[ ]jp_9uU9aDD.jnet2015-04-17 20:19 13KJnet secondary structure output
[TXT]jp_9uU9aDD.profile2015-04-17 20:13 57KPSIBLAST profile from alignment
[ ]jp_9uU9aDD.pssm2015-04-17 20:19 77KPSIBLAST PSSM for Jnet
[TXT]jp_9uU9aDD.results.html2016-02-15 12:21 148KJPred results page
[TXT]jp_9uU9aDD.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_9uU9aDD.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_9uU9aDD.seq2015-04-17 18:16 374 Sequence data file
[TXT]jp_9uU9aDD.simple.html2015-04-17 20:19 2.0KBrief HTML: sequence and prediction only
[TXT]jp_9uU9aDD.svg.html2015-04-17 20:22 140KJalview SVG summary of results
[ ]jp_9uU9aDD.tar.gz2015-04-17 20:22 27MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.