A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:11 | 4.7K | JPred server log file |
| README | 2016-02-15 12:21 | 2.1K | Results file descriptions |
| d3m7va2.name | 2015-04-17 18:16 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_djFx21n.align | 2015-04-17 20:10 | 63K | PSIBLAST alignment in FASTA format |
| jp_djFx21n.als | 2015-04-17 20:10 | 2.6K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_djFx21n.blast.gz | 2015-04-17 20:10 | 292K | Compressed PSIBLAST output file |
| jp_djFx21n.coils.csv | 2015-04-17 20:10 | 744 | COILS output in CSV format |
| jp_djFx21n.coilseq.lupas_14 | 2015-04-17 20:10 | 5.0K | COILS output, window length 14 |
| jp_djFx21n.coilseq.lupas_21 | 2015-04-17 20:10 | 5.0K | COILS output, window length 21 |
| jp_djFx21n.coilseq.lupas_28 | 2015-04-17 20:10 | 5.0K | COILS output, window length 28 |
| jp_djFx21n.concise | 2015-04-17 20:10 | 125K | Prediction: coiled-coil, solvent, alignment |
| jp_djFx21n.concise.blc | 2015-04-17 20:10 | 64K | BLC format prediction and alignment data |
| jp_djFx21n.concise.fasta | 2015-04-17 20:10 | 65K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_djFx21n.concise.pdf | 2015-04-17 20:10 | 405K | PDF prediction and alignment data |
| jp_djFx21n.concise.ps | 2015-04-17 20:10 | 7.3M | Prediction: coiled-coil, solvent, alignment |
| jp_djFx21n.fasta | 2015-04-17 20:04 | 133 | Input query sequence in FASTA format |
| jp_djFx21n.full_MSA.fasta | 2015-04-17 20:10 | 235K | Full MSA before JPred filters in FASTA |
| jp_djFx21n.full_MSA.fasta.noGaps.html | 2015-04-17 20:10 | 292K | Full MSA before JPred filters in FASTA |
| jp_djFx21n.full_MSA.fasta.withGaps.html | 2015-04-17 20:10 | 1.4M | Full MSA before JPred filters in FASTA |
| jp_djFx21n.hmm | 2015-04-17 20:10 | 22K | HHMer2 profile of the alignment |
| jp_djFx21n.html | 2015-04-17 20:10 | 165K | HTML prediction and alignment data |
| jp_djFx21n.input | 2015-04-17 18:16 | 126 | Raw input data for analysis |
| jp_djFx21n.jalview | 2015-04-17 20:10 | 3.2K | Jalview annotation file for alignment |
| jp_djFx21n.jnet | 2015-04-17 20:10 | 4.4K | Jnet secondary structure output |
| jp_djFx21n.profile | 2015-04-17 20:08 | 19K | PSIBLAST profile from alignment |
| jp_djFx21n.pssm | 2015-04-17 20:10 | 26K | PSIBLAST PSSM for Jnet |
| jp_djFx21n.results.html | 2016-02-15 12:21 | 58K | JPred results page |
| jp_djFx21n.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_djFx21n.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_djFx21n.seq | 2015-04-17 18:16 | 133 | Sequence data file |
| jp_djFx21n.simple.html | 2015-04-17 20:10 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_djFx21n.svg.html) | jp_djFx21n.svg.html | 2015-04-17 20:11 | 49K | Jalview SVG summary of results |
| jp_djFx21n.tar.gz | 2015-04-17 20:11 | 944K | Archive containing complete results |
