JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:08 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3m9qa_.name2015-04-17 17:03 0 Job name flag file
[ ]jp_DJu8hlj.align2015-04-17 18:08 43KPSIBLAST alignment in FASTA format
[TXT]jp_DJu8hlj.als2015-04-17 18:08 2.0KAlscript command file for PS/PDF output
[ ]jp_DJu8hlj.blast.gz2015-04-17 18:08 299KCompressed PSIBLAST output file
[TXT]jp_DJu8hlj.coils.csv2015-04-17 18:08 564 COILS output in CSV format
[ ]jp_DJu8hlj.coilseq.lupas_142015-04-17 18:08 3.7KCOILS output, window length 14
[ ]jp_DJu8hlj.coilseq.lupas_212015-04-17 18:08 3.7KCOILS output, window length 21
[ ]jp_DJu8hlj.coilseq.lupas_282015-04-17 18:08 3.7KCOILS output, window length 28
[ ]jp_DJu8hlj.concise2015-04-17 18:08 85KPrediction: coiled-coil, solvent, alignment
[ ]jp_DJu8hlj.concise.blc2015-04-17 18:08 44KBLC format prediction and alignment data
[ ]jp_DJu8hlj.concise.fasta2015-04-17 18:08 44KPrediction: coiled-coil, solvent, alignment
[ ]jp_DJu8hlj.concise.pdf2015-04-17 18:08 246KPDF prediction and alignment data
[ ]jp_DJu8hlj.concise.ps2015-04-17 18:08 4.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_DJu8hlj.fasta2015-04-17 18:04 103 Input query sequence in FASTA format
[ ]jp_DJu8hlj.full_MSA.fasta2015-04-17 18:08 716KFull MSA before JPred filters in FASTA
[TXT]jp_DJu8hlj.full_MSA.fasta.noGaps.html2015-04-17 18:08 181KFull MSA before JPred filters in FASTA
[TXT]jp_DJu8hlj.full_MSA.fasta.withGaps.html2015-04-17 18:08 2.1MFull MSA before JPred filters in FASTA
[ ]jp_DJu8hlj.hmm2015-04-17 18:08 17KHHMer2 profile of the alignment
[TXT]jp_DJu8hlj.html2015-04-17 18:08 130KHTML prediction and alignment data
[ ]jp_DJu8hlj.input2015-04-17 17:03 96 Raw input data for analysis
[ ]jp_DJu8hlj.jalview2015-04-17 18:08 2.6KJalview annotation file for alignment
[ ]jp_DJu8hlj.jnet2015-04-17 18:08 3.3KJnet secondary structure output
[TXT]jp_DJu8hlj.profile2015-04-17 18:07 15KPSIBLAST profile from alignment
[ ]jp_DJu8hlj.pssm2015-04-17 18:08 19KPSIBLAST PSSM for Jnet
[TXT]jp_DJu8hlj.results.html2016-02-15 12:21 45KJPred results page
[TXT]jp_DJu8hlj.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_DJu8hlj.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_DJu8hlj.seq2015-04-17 17:03 103 Sequence data file
[TXT]jp_DJu8hlj.simple.html2015-04-17 18:08 1.1KBrief HTML: sequence and prediction only
[TXT]jp_DJu8hlj.svg.html2015-04-17 18:08 37KJalview SVG summary of results
[ ]jp_DJu8hlj.tar.gz2015-04-17 18:08 764KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.