JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:15 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3mcwa_.name2015-04-17 17:41 0 Job name flag file
[ ]jp_XcMYCms.align2015-04-17 19:14 195KPSIBLAST alignment in FASTA format
[TXT]jp_XcMYCms.als2015-04-17 19:14 2.9KAlscript command file for PS/PDF output
[ ]jp_XcMYCms.blast.gz2015-04-17 19:12 12MCompressed PSIBLAST output file
[TXT]jp_XcMYCms.coils.csv2015-04-17 19:14 1.2KCOILS output in CSV format
[ ]jp_XcMYCms.coilseq.lupas_142015-04-17 19:14 8.2KCOILS output, window length 14
[ ]jp_XcMYCms.coilseq.lupas_212015-04-17 19:14 8.2KCOILS output, window length 21
[ ]jp_XcMYCms.coilseq.lupas_282015-04-17 19:14 8.2KCOILS output, window length 28
[ ]jp_XcMYCms.concise2015-04-17 19:14 384KPrediction: coiled-coil, solvent, alignment
[ ]jp_XcMYCms.concise.blc2015-04-17 19:14 196KBLC format prediction and alignment data
[ ]jp_XcMYCms.concise.fasta2015-04-17 19:14 197KPrediction: coiled-coil, solvent, alignment
[ ]jp_XcMYCms.concise.pdf2015-04-17 19:14 1.3MPDF prediction and alignment data
[ ]jp_XcMYCms.concise.ps2015-04-17 19:14 24MPrediction: coiled-coil, solvent, alignment
[ ]jp_XcMYCms.fasta2015-04-17 19:03 210 Input query sequence in FASTA format
[ ]jp_XcMYCms.full_MSA.fasta2015-04-17 19:13 25MFull MSA before JPred filters in FASTA
[TXT]jp_XcMYCms.full_MSA.fasta.noGaps.html2015-04-17 19:15 2.3MFull MSA before JPred filters in FASTA
[TXT]jp_XcMYCms.full_MSA.fasta.withGaps.html2015-04-17 19:15 56MFull MSA before JPred filters in FASTA
[ ]jp_XcMYCms.hmm2015-04-17 19:14 37KHHMer2 profile of the alignment
[TXT]jp_XcMYCms.html2015-04-17 19:14 390KHTML prediction and alignment data
[ ]jp_XcMYCms.input2015-04-17 17:41 202 Raw input data for analysis
[ ]jp_XcMYCms.jalview2015-04-17 19:14 4.7KJalview annotation file for alignment
[ ]jp_XcMYCms.jnet2015-04-17 19:14 7.2KJnet secondary structure output
[TXT]jp_XcMYCms.profile2015-04-17 19:10 31KPSIBLAST profile from alignment
[ ]jp_XcMYCms.pssm2015-04-17 19:14 42KPSIBLAST PSSM for Jnet
[TXT]jp_XcMYCms.results.html2016-02-15 12:21 86KJPred results page
[TXT]jp_XcMYCms.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_XcMYCms.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_XcMYCms.seq2015-04-17 17:41 210 Sequence data file
[TXT]jp_XcMYCms.simple.html2015-04-17 19:14 1.5KBrief HTML: sequence and prediction only
[TXT]jp_XcMYCms.svg.html2015-04-17 19:15 78KJalview SVG summary of results
[ ]jp_XcMYCms.tar.gz2015-04-17 19:15 20MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.