JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:15 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3mmha_.name2015-04-17 19:30 0 Job name flag file
[ ]jp_g9AQqZH.align2015-04-17 22:14 178KPSIBLAST alignment in FASTA format
[TXT]jp_g9AQqZH.als2015-04-17 22:14 2.8KAlscript command file for PS/PDF output
[ ]jp_g9AQqZH.blast.gz2015-04-17 22:12 10MCompressed PSIBLAST output file
[TXT]jp_g9AQqZH.coils.csv2015-04-17 22:14 1.0KCOILS output in CSV format
[ ]jp_g9AQqZH.coilseq.lupas_142015-04-17 22:14 7.1KCOILS output, window length 14
[ ]jp_g9AQqZH.coilseq.lupas_212015-04-17 22:14 7.1KCOILS output, window length 21
[ ]jp_g9AQqZH.coilseq.lupas_282015-04-17 22:14 7.1KCOILS output, window length 28
[ ]jp_g9AQqZH.concise2015-04-17 22:14 348KPrediction: coiled-coil, solvent, alignment
[ ]jp_g9AQqZH.concise.blc2015-04-17 22:14 178KBLC format prediction and alignment data
[ ]jp_g9AQqZH.concise.fasta2015-04-17 22:14 180KPrediction: coiled-coil, solvent, alignment
[ ]jp_g9AQqZH.concise.pdf2015-04-17 22:15 1.2MPDF prediction and alignment data
[ ]jp_g9AQqZH.concise.ps2015-04-17 22:14 22MPrediction: coiled-coil, solvent, alignment
[ ]jp_g9AQqZH.fasta2015-04-17 22:07 183 Input query sequence in FASTA format
[ ]jp_g9AQqZH.full_MSA.fasta2015-04-17 22:13 32MFull MSA before JPred filters in FASTA
[TXT]jp_g9AQqZH.full_MSA.fasta.noGaps.html2015-04-17 22:15 3.3MFull MSA before JPred filters in FASTA
[TXT]jp_g9AQqZH.full_MSA.fasta.withGaps.html2015-04-17 22:15 77MFull MSA before JPred filters in FASTA
[ ]jp_g9AQqZH.hmm2015-04-17 22:14 32KHHMer2 profile of the alignment
[TXT]jp_g9AQqZH.html2015-04-17 22:14 380KHTML prediction and alignment data
[ ]jp_g9AQqZH.input2015-04-17 19:30 175 Raw input data for analysis
[ ]jp_g9AQqZH.jalview2015-04-17 22:14 4.2KJalview annotation file for alignment
[ ]jp_g9AQqZH.jnet2015-04-17 22:14 6.2KJnet secondary structure output
[TXT]jp_g9AQqZH.profile2015-04-17 22:10 27KPSIBLAST profile from alignment
[ ]jp_g9AQqZH.pssm2015-04-17 22:14 36KPSIBLAST PSSM for Jnet
[TXT]jp_g9AQqZH.results.html2016-02-15 12:21 76KJPred results page
[TXT]jp_g9AQqZH.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_g9AQqZH.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_g9AQqZH.seq2015-04-17 19:30 183 Sequence data file
[TXT]jp_g9AQqZH.simple.html2015-04-17 22:14 1.5KBrief HTML: sequence and prediction only
[TXT]jp_g9AQqZH.svg.html2015-04-17 22:15 67KJalview SVG summary of results
[ ]jp_g9AQqZH.tar.gz2015-04-17 22:15 20MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.